Job Description P0A9E9 Confidence 99.52% Date Thu Jan 5 11:10:01 GMT 2012 Rank 39 Aligned Residues 118 % Identity 19% Template c3otfA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic PDBTitle: structural basis for the camp-dependent gating in human hcn4 channel Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	K	D	C	F	L	T	D	V	S	A	D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	P	R
Query Conservation
Alig confidence																																																									.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		A	N	A	D	P	N	F	V	T	S	M	L	T	K	L	R	F	E	V	F	Q	P	G	D	Y	I	I	R	E	G	T	I	G	K	K	M	Y	F	I	Q	H	G	V	V	S	V	L	T	K	G	N	K	E	T	K	.	.	.	.	.	L	A	D	G	S	Y	F	G	E	I	C	L	L	T	R	G	R	R	T	A
Template Known Secondary structure			T	S										T	T								T	T						T	T	S																		S	S	S					.	.	.	.	.			T	T												S			S	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.						.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	A	I	E	E	C	W	C	L	A	L	P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	R	A	D	T	Y	C	R	L	Y	S	L	S	V	D	N	F	N	E	V	L	E	E	Y	P	M	M	R	R	A	F	E	T	V	A	L	D	R	L	D	R	I
Template Known Secondary structure						S	S																				G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions