Job Description P0A9E9 Confidence 99.78% Date Thu Jan 5 11:10:01 GMT 2012 Rank 23 Aligned Residues 132 % Identity 15% Template c3gydA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:cyclic nucleotide-binding domain; PDBTitle: crystal structure of a cyclic nucleotide-binding domain (mfla_1926)2 from methylobacillus flagellatus kt at 1.79 a resolution Resolution 1.79 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	K	D	C	F	L	T	D	V	S	A	D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	F	S	N	E	E	V	R	Y	L	C	S	Y	X	Q	C	Y	A	A	P	R	D	C	Q	L	L	T	E	G	D	P	G	D	Y	L	L	L	I	L	T	G	E	V	N	V	I	K	D	I	P	N	K	G	I	Q	T	I	A	K	V	G	A	G	A	I	I	G	E	X	S	X	I	D	G	X	P	R	S	A
Template Known Secondary structure														T	T								T	T						T	T	S																				T	T	T										T	T				S											S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	A	I	E	E	C	W	C	L	A	L	P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N	I	V	S	L	T	Q	N	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	C	V	A	S	L	P	T	D	F	A	V	L	S	R	D	A	L	Y	Q	L	L	A	N	X	P	K	L	G	N	K	V	L	I	R	L	L	Q	L	L	T	A	R	F	R	E	S	Y	D	R	I	L
Template Known Secondary structure																																																					G
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions