Job Description P0A9E9 Confidence 79.40% Date Thu Jan 5 11:10:01 GMT 2012 Rank 277 Aligned Residues 156 % Identity 11% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	.	.	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	P	R	A	V	Q	A	I	E	E	C	W	C	L
Query Conservation																								.	.
Alig confidence																								.	.																		.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		Q	T	N	V	Y	R	M	S	K	F	D	T	Y	I	F	N	N	L	Y	I	N	D	Y	K	M	F	W	I	D	S	G	I	A	K	L	I	D	K	N	C	L	.	.	.	.	V	S	Y	E	I	N	S	S	S	I	I	L	L	K	K	N	S	I	Q	R	F	S	L	T	S	L	S	D	E	N	I	N	V	S	V
Template Known Secondary structure										T	T											S	S							S	S	S							T	T	T	T	.	.	.	.							T	T							T	T												S	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.																																		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	P	M	K	H	Y	R	P	L	L	L	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N	I	V	S	L	T	Q	N	Q	S	F	P	L	V	N	R
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	I	S	D	S	F	I	R	S	L	K	S	Y	I	L	G	N	K	D	L	L	L	W	N	C	E	H	N	D	I	A	V	L	S	E	V	V	N	G	F	R	E	I	N	Y	S	D	E	F	L	K	V	F	F	S	G	F	F	S	K	V	E	K	K	Y	N	S	I	F	I	T	D	D	L	D	A	M	E	K
Template Known Secondary structure																													S	S										T	T	T	S	S																				T	T	T	S	S	S		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	F	I	L	L	S	Q	E	G	D	L	Y	H	E	K	H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L	Y	V	L	A	Q
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		I	S	C	L	V	K	S	D	I	T	R	.	.	.	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	S
Template Known Secondary structure									T	T	T	S	.	.	.												T												T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions