Job Description P0A9E9 Confidence 100.00% Date Thu Jan 5 11:10:01 GMT 2012 Rank 2 Aligned Residues 203 % Identity 16% Template c3dv8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family; PDBTitle: crystal structure of a putative transcriptional regulator of the2 crp/fnr family (eubrec_1222) from eubacterium rectale atcc 33656 at3 2.55 a resolution Resolution 2.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		S	A	F	K	D	C	F	L	T	D	V	S	A	D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	.	.	F	I	G	E	I	E	L	I	D	K	D	H	E
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		N	D	L	N	T	A	Q	K	K	L	I	S	D	N	L	I	T	Q	H	V	K	K	G	T	I	I	H	N	G	N	X	D	C	T	G	L	L	L	V	K	S	G	Q	L	R	T	Y	I	L	S	D	E	G	R	E	I	T	L	Y	R	L	F	D	X	D	X	C	L	L	S	A	S	C	I	X	R	S	I	Q	F
Template Known Secondary structure		G	T	S										T	T								T	T						G	G	G											S									T	T	S										T	T				S	G	G	G	G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		P	R	A	V	Q	A	I	E	E	C	W	C	L	A	L	P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N	I	V	S	L	T	Q	N	Q	S	F	P	L	V	N	R	L	A	A	F	I	L	L	S	.	.	.	Q	E	G	D	L	Y	H	E	K
Query Conservation																																																																						.	.	.
Alig confidence																																																																						.	.	.
Template Conservation
Template Sequence		E	V	T	I	E	A	E	K	D	T	D	L	W	I	I	P	A	E	I	Y	K	G	I	X	K	D	S	A	P	V	A	N	Y	T	N	E	L	X	A	T	R	F	S	D	V	X	W	L	I	E	Q	I	X	W	K	S	L	D	K	R	V	A	S	F	L	L	E	E	T	S	I	E	G	T	N	E	L	K	I	T
Template Known Secondary structure								S	S																																															S																		T	S	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L	Y	V	L	A	Q	F	I	H	D	G	L	L	I	K	S	K	K	G	Y	L	I	K	N	R	K	Q	L	S	G	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	E	T	I	A	N	H	L	G	S	H	R	E	V	I	T	R	X	L	R	Y	F	Q	V	E	G	L	V	K	L	S	R	G	K	I	T	I	L	D	S	K	R	L	E	T	L	Q	R
Template Known Secondary structure										T																T	T	S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions