Job Description P0A9E9 Confidence 99.96% Date Thu Jan 5 11:10:01 GMT 2012 Rank 14 Aligned Residues 201 % Identity 14% Template c3dkwB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:dnr protein; PDBTitle: crystal structure of dnr from pseudomonas aeruginosa. Resolution 3.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		S	A	F	K	D	C	F	L	T	D	V	S	A	D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	.	P
Query Conservation																																																																																.
Alig confidence																																																																																.
Template Conservation
Template Sequence		E	P	L	S	P	V	Q	L	Q	E	L	L	A	S	S	D	L	V	N	L	D	K	G	A	Y	V	F	R	Q	G	E	P	A	H	A	F	Y	Y	L	I	S	G	C	V	K	I	Y	R	L	T	P	E	G	Q	E	K	I	L	E	V	T	N	E	R	N	T	F	A	E	A	M	M	F	M	D	T	P	N	Y	V
Template Known Secondary structure		S	S	S																			T	T			S			S	S	S	B										S								S	S	S	S	S									T	T				S						T	T		S	B		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.
Query Sequence		R	A	V	Q	A	I	E	E	C	W	C	L	A	L	P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N	I	V	S	L	T	Q	N	Q	S	F	P	L	V	N	R	L	A	A	F	I	L	L	S	.	.	.	.	.	.	.	Q	E	G	D	L	Y
Query Conservation																																																																					.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	A	Q	A	V	V	P	S	Q	L	F	R	F	S	N	K	A	Y	L	R	Q	L	Q	D	N	T	P	L	A	L	A	L	L	A	K	L	S	T	R	L	H	Q	R	I	D	E	I	E	T	L	S	L	K	N	A	T	H	R	V	V	R	Y	L	L	T	L	A	A	H	A	P	G	E	N	C	R	V	E	I
Template Known Secondary structure		S					S	S																	S	S		S																																									S	S	S	S	S	S		S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	K	H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L	Y	V	L	A	Q	F	I	H	D	G	L	L	I	K	S	K	K	G	Y	L	I	K	N	R	K	Q	L	S	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	K	Q	L	V	A	G	H	L	S	I	Q	P	E	T	F	S	R	I	M	H	R	L	G	D	E	G	I	I	H	L	D	G	R	E	I	S	I	L	D	R	E	R	L	E	C	F
Template Known Secondary structure					T	T						T	T																	T	S	S		S	S	S	S	S				S		S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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