Job Description P0A9E9 Confidence 99.96% Date Thu Jan 5 11:10:01 GMT 2012 Rank 13 Aligned Residues 187 % Identity 19% Template c2zcwA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, fnr/crp family; PDBTitle: crystal structure of ttha1359, a transcriptional regulator,2 crp/fnr family from thermus thermophilus hb8 Resolution 1.50 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	.	.	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	P	R	A	V	Q	A	I	E	E	C	W	C	L	A	L
Query Conservation																			.	.
Alig confidence																			.	.																																										.
Template Conservation																																																														.
Template Sequence		E	T	V	S	F	K	A	G	D	V	I	L	Y	P	G	V	P	G	P	R	D	R	A	Y	R	V	L	E	G	L	V	R	L	E	A	V	D	E	E	G	N	A	L	T	L	R	L	V	R	P	G	G	F	F	G	E	E	A	L	F	.	G	Q	E	R	I	Y	F	A	E	A	A	T	D	V	R	L	E	P	L
Template Known Secondary structure								T	T						S	B	S			T	T									S									T	T	S										T	T					T					.	T			B		S					S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N	I	V	S	L	T	Q	N	Q	S	F	P	L	V	N	R	L	A	A	F	I	L	L	S	Q	E	G	.	.	D	L	Y	H	E	K	H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L
Query Conservation																																																										.	.
Alig confidence																																																										.	.
Template Conservation
Template Sequence		P	E	N	P	D	P	E	L	L	K	D	L	A	Q	H	L	S	Q	G	L	A	E	A	Y	R	R	I	E	R	L	A	T	Q	R	L	K	N	R	X	A	A	A	L	L	E	L	S	E	T	P	L	A	H	E	E	E	G	K	V	V	L	K	A	T	H	D	E	L	A	A	A	V	G	S	V	R	E	T	V	T
Template Known Secondary structure			S	S																																												T	T	S	T	T					T	T																T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	L	A	Q	F	I	H	D	G	L	L	I	K	S	K	K	G	Y	L	I	K	N	R	K	Q	L	S	G	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	I	G	E	L	A	R	E	G	Y	I	R	S	G	Y	G	K	I	Q	L	L	D	L	K	G	L	K	E	L	A	E
Template Known Secondary structure										T	T	S					T	T					S										T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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