Job Description P0A9E9 Confidence 99.53% Date Thu Jan 5 11:10:01 GMT 2012 Rank 38 Aligned Residues 116 % Identity 18% Template c2ptmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hyperpolarization-activated (ih) channel; PDBTitle: structure and rearrangements in the carboxy-terminal region of spih2 channels Resolution 1.93 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	K	D	C	F	L	T	D	V	S	A	D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	P	R
Query Conservation
Alig confidence																																																						.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		V	G	A	D	S	N	F	V	T	R	V	V	T	L	L	E	F	E	V	F	Q	P	A	D	Y	V	I	Q	E	G	T	F	G	D	R	M	F	F	I	Q	Q	G	I	V	D	I	I	M	S	D	G	V	.	.	.	.	I	A	T	S	L	S	D	G	S	Y	F	G	E	I	C	L	L	T	R	E	R	R	V	A
Template Known Secondary structure		T	T																				T	T						T	T	S			S															T	T	S		.	.	.	.							T	T				S							S	S			S	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.					.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Q	A	I	E	E	C	W	C	L	A	L	P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	K	C	E	T	Y	C	T	L	F	S	L	S	V	Q	H	F	N	Q	V	L	D	E	F	P	A	M	R	K	T	M	E	E	I	A	V	R	R	L
Template Known Secondary structure						S	S																																T
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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