 |
Job Description | P0A9E9 | Confidence | 56.58% | Date | Thu Jan 5 11:10:01 GMT 2012 |
Rank | 401 | Aligned Residues | 40 |
% Identity | 15% | Template | c2ewtA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:putative dna-binding protein; |
PDBTitle: crystal structure of the dna-binding domain of bldd
|
Resolution | 1.81 Å |
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | |
|
. | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | H | T | Q | A | A | E | Y | L | G | . |
. |
V | S | Y | R | H | L | L | Y | V | L | A | Q | F | I | H | D | G | L | L | I | K | S | K | K | G | Y | L | I | K | N | R | K | Q | L | S | G | L | A | L | E | M | D |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |
|
| . | . |   |
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
Template Sequence |   |
L | S | L | H | G | V | E | E | K | S | Q | G | R | W | K | A | V | V | V | G | S | Y | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | G | D | R | A | V | T | V | Q | R | L | A | E | L | A | D | F | Y | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|