Job Description P0A9E9 Confidence 99.96% Date Thu Jan 5 11:10:01 GMT 2012 Rank 16 Aligned Residues 193 % Identity 16% Template c1ft9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:carbon monoxide oxidation system transcription PDBTitle: structure of the reduced (feii) co-sensing protein from r.2 rubrum Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	D	C	F	L	T	D	V	S	A	D	T	R	L	F	H	F	L	A	R	D	Y	I	V	Q	E	G	Q	Q	P	S	W	L	F	Y	L	T	R	G	R	A	R	L	Y	A	T	L	A	N	G	R	V	S	L	I	D	F	F	A	A	P	C	F	I	G	E	I	E	L	I	D	K	D	H	E	P	R	A
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		V	L	L	S	P	D	G	E	T	F	F	R	G	F	R	S	K	I	H	A	K	G	S	L	V	C	T	G	E	G	D	E	N	G	V	F	V	V	V	D	G	R	L	R	V	Y	L	V	G	E	E	R	E	I	S	L	F	Y	L	T	S	G	D	M	F	C	M	H	.	.	.	.	.	.	.	.	S	G	C	L
Template Known Secondary structure				T	S	T	T	T	T	T	T	T	T	T								T	T						T	T												S									T	T										T	T					S		.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.									.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.
Query Sequence		V	Q	A	I	E	E	C	W	C	L	A	L	P	M	K	H	Y	R	P	L	L	L	N	D	T	L	F	L	R	K	L	C	V	T	L	S	H	K	N	Y	R	N	I	V	S	L	T	Q	N	Q	S	F	P	L	V	N	R	L	A	A	F	I	L	L	S	.	.	.	.	.	.	.	.	Q	E	G	D	L	Y	H
Query Conservation																																																																			.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	A	T	E	R	T	E	V	R	F	A	D	I	R	T	F	E	Q	K	L	Q	T	C	P	S	M	A	W	G	L	I	A	I	L	G	R	A	L	T	S	C	M	R	T	I	E	D	L	M	F	H	D	I	K	Q	R	I	A	G	F	F	I	D	H	A	N	T	T	G	R	Q	T	G	V	I	V	S	V	D
Template Known Secondary structure					S	S																				G	G	G																								T														T		B				S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		E	K	H	T	Q	A	A	E	Y	L	G	V	S	Y	R	H	L	L	Y	V	L	A	Q	F	I	H	D	G	L	L	I	K	S	.	K	K	G	Y	L	I	K	N	R	K	Q	L	S	G	L	A
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		F	T	V	E	E	I	A	N	L	I	G	S	S	R	Q	T	T	S	T	A	L	N	S	L	I	K	E	G	Y	I	S	R	Q	G	R	G	H	Y	T	I	P	N	L	V	R	L	K	A	A	A
Template Known Secondary structure													S															T	T	S	S				S	T	T					S	S							T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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