 |
Job Description | P0A9E9 | Confidence | 37.01% | Date | Thu Jan 5 11:10:01 GMT 2012 |
Rank | 479 | Aligned Residues | 50 |
% Identity | 6% | Template | c1dpuA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; |
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
|
Resolution | UNK |
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | P | L | V | N | R | L | A | A | F | I | L | L | S | Q | E | G | D | L | Y | H | E | K | H | T | Q | A | A | E | Y | L | . |
G | V | S | Y | R | H | L | L | Y | V | L | A | Q | F | I | H | D | G | L | L |
Query Conservation |   |
  |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
| . |
|   |
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |   | . |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
|
Template Sequence |   |
L | T | V | A | Q | N | Q | V | L | N | L | I | K | A | C | P | . |
R | P | E | G | L | N | F | Q | D | L | K | N | Q | L | K | H | M | S | V | S | S | I | K | Q | A | V | D | F | L | S | N | E | G | H | I |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
| T | T | T |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|