Job Description P09546 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 29 Aligned Residues 349 % Identity 100% Template d1tj1a2 SCOP info TIM beta/alpha-barrel FAD-linked oxidoreductase Proline dehydrohenase domain of bifunctional PutA protein Resolution 2.00

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		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	Y	D	M	L	G	E	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S	Y	Q	Q	A	I	H	A	I	G	K	A	S	N	G	R	G	I	Y	E	G	P	G	I	S	I	K	L	S	A	L	H	P	R	Y	S	R	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	Y	D	M	L	G	E	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S	Y	Q	Q	A	I	H	A	I	G	K	A	S	N	G	R	G	I	Y	E	G	P	G	I	S	I	K	L	S	A	L	H	P	R	Y	S	R	A	Q
Template Known Secondary structure				S							T						T	T	T														S																							T	T						S											S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	S	D	R	L	E	I	S	L	D	L	L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I	Q	A	Y	Q	K	R	C	P	L	V	I	D	Y	L	I	D	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	S	D	R	L	E	I	S	L	D	L	L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I	Q	A	Y	Q	K	R	C	P	L	V	I	D	Y	L	I	D	L	A
Template Known Secondary structure																							T	T										G	G	G													T		G	G	G	T	T										T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	R	R	R	L	M	I	R	L	V	K	G	A	Y	W	D	S	E	I	K	R	A	Q	M	D	G	L	E	G	Y	P	V	Y	T	R	K	V	Y	T	D	V	S	Y	L	A	C	A	K	K	L	L	A	V	P	N	L	I	Y	P	Q	F	A	T	H	N	A	H	T	L	A	A	I	Y	Q	L	A	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	S	R	R	R	L	M	I	R	L	V	K	G	A	Y	W	D	S	E	I	K	R	A	Q	M	D	G	L	E	G	Y	P	V	Y	T	R	K	V	Y	T	D	V	S	Y	L	A	C	A	K	K	L	L	A	V	P	N	L	I	Y	P	Q	F	A	T	H	N	A	H	T	L	A	A	I	Y	Q	L	A	G	Q
Template Known Secondary structure				T	T	S										S													T		S	S		S	B		S	S																	T		T	T	T																				T		S
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Y	P	G	Q	Y	E	F	Q	C	L	H	G	M	G	E	P	L	Y	E	Q	V	T	G	K	V	A	D	G	K	L	N	R	P	C	R	I	Y	A	P	V	G	T	H	E	T	L	L	A	Y	L	V	R	R	L	L	E	N	G	A	N	T	S	F	V	N	R	I	A	D	T	S	L	P	L	D	E	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	Y	P	G	Q	Y	E	F	Q	C	L	H	G	M	G	E	P	L	Y	E	Q	V	T	G	K	V	A	D	G	K	L	N	R	P	C	R	I	Y	A	P	V	G	T	H	E	T	L	L	A	Y	L	V	R	R	L	L	E	N	G	A	N	T	S	F	V	N	R	I	A	D	T	S	L	P	L	D	E	L	V
Template Known Secondary structure		S			T	T	S							T	T	T	S					T	T	T	S	S		G	G	G	T															G	G	G															T	T	S					T	T		T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	P	V	T	A	V	E	K	L	A	Q	Q	E	G	Q	T	G	L	P	H	P	K	I	P	L	P	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	P	V	T	A	V	E	K	L	A	Q	Q	E	G	Q	T	G	L	P	H	P	K	I	P	L	P	R	D
Template Known Secondary structure																S	S	T	T				T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions