Return to main results Retrieve Phyre Job Id

Job DescriptionP09546
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank36Aligned Residues443
% Identity25%Templatec3rosA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nad-dependent aldehyde dehydrogenase; PDBTitle: crystal structure of nad-dependent aldehyde dehydrogenase from2 lactobacillus acidophilus
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   659660.........670.........680.........690.........700.........710.........720.........730........
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  EMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSN
Query Conservation      
 



   


 
  

 


  

 

  
   
   
  


 

 
 



     


 
   





 
Alig confidence 










.



































































Template Conservation         
 
 .  

         
  

  
  
   
       
  

   
  
      

     
 

    
Template Sequence  SKYQSVNPYTN. EAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKXXTLEXGKLLSE
Template Known Secondary structure 


TTTT.




TTS
TT


Template Predicted Secondary structure 







.











Template SS confidence 















































































   2.......10.. .......20.........30.........40.........50.........60.........70.........80
 
   739740.........750.........760.... .....770.........780.........790.........800.......
Predicted Secondary structure 


...........
















Query SS confidence 

























. . . . . . . . . . .










































Query Sequence  AIAEVREAVDFLHYYAGQVRDDFANE. . . . . . . . . . . THRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQT
Query Conservation 
  

 



 




  
       ...........   




 










  
 
















 
Alig confidence 

























...........










































Template Conservation 
  

                                   
 


  
 
 
 
          

 


 

 

    
Template Sequence  SKEEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNV
Template Known Secondary structure  TS


TTS




SSSTTT



TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   808.810.........820.........830.........840.........850.........860.........870.........880.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  PLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGM
Query Conservation 

 
  
 


 




 





 
 
  

  

  
 
  
 




 

  
   

  
       








Alig confidence 


























.



































......









Template Conservation        
 
 
  

 
 
    
   .      
     
  
 



   
  
        ......     
 

 
Template Sequence  PGSAALTAKIIKRAGAPEGSLINLYPS. YDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNL. . . . . . KKSTXELGGN
Template Known Secondary structure  T

TTS


.TSTTS
TT......




Template Predicted Secondary structure 







.










......









Template SS confidence 















































































   161........170.........180....... ..190.........200.........210.........220... ......230...
 
   888.890.........900.........910.........920.........930.........940.........950.........960.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  NAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKAN
Query Conservation 

 

  




 

  

 


  


 


 




  

 
 
 
 
  
   
 



 
  
 




   
  
Alig confidence 















































































Template Conservation     

  



  

  
        

 
 
   
 
   
 
 
   
      
  
         

         
Template Sequence  DAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEK
Template Known Secondary structure 

TT

TTTTTGGGG

TTS

GGGT

BS
TTSTT

B


S
Template Predicted Secondary structure 


































Template SS confidence 















































































   234.....240.........250.........260.........270.........280.........290.........300.........310...
 
   968.970.........980.........990.........1000........ .1010.........1020.........1030.........1040.....
Predicted Secondary structure 




















..














Query SS confidence 








































. .




































Query Sequence  IERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIE. . LDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASG
Query Conservation 
   
  
   

 
  

            
 

 



 ..        







 



  







 

 
 
Alig confidence 
























......









..




















..













Template Conservation      
  
   

            ......     



            
 




 
   .. 
 



   
   
Template Sequence  LEAQVKEAIDAGAKVFYQYPEIDSK. . . . . . GAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVV. . EDDNAAIQLANDSS
Template Known Secondary structure  TT






S......S







TTSTTTTS


SS..SSSSS
Template Predicted Secondary structure 









......














..




Template SS confidence 















































































   314.....320.........330........ .340.........350.........360.........370. ........380.....
 
   1046...1050.........1060.........1070.........1080.........1090.........1100.........1110.........1120
Predicted Secondary structure 













































Query SS confidence 










































































Query Sequence  YGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAV
Query Conservation 






 
 
   
      
 







   



  




 
 

 
 




 

  
           
Alig confidence 



































..















.



















Template Conservation   

 
 
 
 
          
  
 
 

      ..   



   

 
  . 
  

  
   
 
   
 
Template Sequence  YGLGSSVIGSDIDRAKKVSAQIETGXTVINGRWITS. . GELPFGGIKKSGYGRE. LSGLGLXAFVNEHLVIDVTK
Template Known Secondary structure 

S

S
S
SS

TS




..TTS
B

SGGGS
B.STTT

GG
Template Predicted Secondary structure 
















..















.






Template SS confidence 










































































   386...390.........400.........410.........420. ........430....... ..440.........450.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions