Job Description P09546 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 15 Aligned Residues 454 % Identity 27% Template c3rh9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+)); PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei Resolution 2.63 Å

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		646	.	.	.	650	.	.	.	.	.				.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		Q	A	L	P	M	L	E	Q	P	V	.	.	.	A	A	G	E	M	S	P	V	I	N	P	A	E	P	K	D	I	V	G	Y	V	R	E	A	T	P	R	E	V	E	Q	A	L	E	S	A	V	N	N	A	P	I	W	F	A	T	P	P	A	E	R	A	A	I	L	H	R	A	A	V	L	M	E	S	Q	M	Q
Query Conservation												.	.	.
Alig confidence												.	.	.															.
Template Conservation																													.
Template Sequence		N	L	T	G	Y	I	G	G	R	W	K	D	S	A	G	G	A	T	F	D	V	Y	N	P	A	T	G	.	S	V	I	A	K	V	P	S	X	P	E	E	D	V	V	A	A	V	E	A	G	Q	S	A	L	R	L	T	N	P	W	P	I	E	T	R	R	K	W	L	E	D	I	R	D	G	L	K	E	N	R	E
Template Known Secondary structure				S				T	T							T	T								T	T	T		.																											S	S	S																					T
Template Predicted Secondary structure																													.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.													.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	I	G	I	L	V	R	E	A	G	K	T	F	S	N	A	I	A	E	V	R	E	A	V	D	F	L	H	Y	Y	A	G	Q	V	R	D	D	F	A	N	E	.	.	.	.	.	.	.	.	.	.	.	.	T	H	R	P	L	G	P	V	V	C	I	S	P	W	N	F	P	L	A	I	F	T	G	Q	I	A
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	G	R	I	L	C	X	E	H	G	K	P	W	K	E	A	Q	G	E	V	D	Y	A	A	G	F	F	D	Y	C	A	K	H	I	S	A	L	D	S	H	T	I	P	E	K	P	K	D	C	T	W	T	V	H	Y	R	P	V	G	V	T	G	L	I	V	P	W	N	F	P	I	G	X	I	A	K	K	L	S
Template Known Secondary structure																																				G	G	G	G						S			G	G	G												S							S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		791	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	A	A	G	N	S	V	L	A	K	P	A	E	Q	T	P	L	I	A	A	Q	G	I	A	I	L	L	E	A	G	V	P	P	G	V	V	Q	L	L	P	G	R	G	E	T	V	G	A	Q	L	T	G	D	D	R	V	R	G	V	M	F	T	G	S	T	E	V	A	T	L	L	Q	R	N	I	A	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	A	A	G	C	P	S	V	I	K	P	A	S	E	T	P	L	T	X	I	A	F	F	S	V	X	D	K	L	D	L	P	D	G	X	V	N	L	V	X	G	K	A	S	V	I	G	K	V	L	C	E	H	K	D	V	P	X	L	S	F	T	G	S	T	E	V	G	R	K	L	I	V	D	T	A	E	Q
Template Known Secondary structure							T									T	T	S												T	T	T	T			T	T	S						S													T	T								S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		871	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	Q	G	R	P	I	P	L	I	A	E	T	G	G	M	N	A	M	I	V	D	S	S	A	L	T	E	Q	V	V	V	D	V	L	A	S	A	F	D	S	A	G	Q	R	C	S	A	L	R	V	L	C	L	Q	D	E	I	A	D	H	T	L	K	M	L	R	G	A	M	A	E	C	R	M	G	N	P	G
Query Conservation
Alig confidence			.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	K	K	L	A	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	E	A	A	A	D	N	L	I	A	N	K	F	R	G	G	G	Q	T	C	V	C	A	N	R	I	F	V	H	E	K	V	A	D	A	F	G	Q	K	L	A	E	R	V	N	K	X	T	V	G	D	G	X
Template Known Secondary structure		T	.	.	.	.	.	.																	T	T	S															G	G	G	G		S	S	S	S								T	T	T																	B	S		T	T
Template Predicted Secondary structure			.	.	.	.	.	.
Template SS confidence
		248							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		951	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.			.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		R	L	T	T	D	I	G	P	V	I	D	S	E	A	K	A	N	I	E	R	H	I	Q	T	M	R	S	K	G	R	P	V	F	Q	A	V	R	E	N	S	E	D	A	R	E	W	Q	S	G	T	F	V	A	P	T	L	I	E	.	.	L	D	D	F	A	E	L	Q	K	E	V	F	G	P	V	L	H	V	V	R
Query Conservation																																																												.	.
Alig confidence																																												.	.	.	.	.												.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		N	D	G	I	D	I	G	P	L	I	N	K	Q	G	F	D	K	V	K	R	H	L	Q	D	A	L	D	K	G	A	S	L	V	A	G	K	Q	P	A	E	L	G	.	.	.	.	.	D	G	L	F	F	P	P	T	V	V	Q	G	V	D	R	E	X	C	C	Y	Q	E	E	T	F	G	P	L	V	P	X	A	L
Template Known Secondary structure		S	T	T		S	B				S																		T	T						S			G	G	G			.	.	.	.	.	S	S	S												T	T	S					S				S	S
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		1029	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	R	N	Q	L	P	E	L	I	E	Q	I	N	A	S	G	Y	G	L	T	L	G	V	H	T	R	I	D	E	T	I	A	Q	V	T	G	S	A	H	V	G	N	L	Y	V	N	R	N	M	V	G	A	V	V	G	V	Q	P	F	G	G	E	G	L	S	G	T	G	P	K	A	G	G	P	L	Y	L	Y	R
Query Conservation
Alig confidence			.	.																																																.	.																		.
Template Conservation			.	.																																																.	.																		.
Template Sequence		F	.	.	R	T	E	E	E	V	I	D	A	G	N	D	T	E	F	G	L	A	S	Y	V	F	T	A	D	A	E	R	A	Q	R	V	A	A	G	L	R	F	G	H	V	G	W	N	T	G	T	.	.	G	P	T	P	E	A	P	F	G	G	X	K	A	S	G	I	G	.	R	E	G	G	L	E	G	L	F	E
Template Known Secondary structure			.	.											T		S	S			S							S															S					S				.	.				T	T	S		B			S	G	G	G			S	.		B	S						T	T
Template Predicted Secondary structure			.	.																																																.	.																		.
Template SS confidence
		397			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.			.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.		.	.	.	.	.	.	.	.	470	.
		1109	1110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	N	R	P	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	E	A	Q	T	V	P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.