Job Description P09546 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 38 Aligned Residues 436 % Identity 27% Template c3pqaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactaldehyde dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661 Resolution 1.50 Å

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		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	E	M	S	P	V	I	N	P	A	E	P	K	D	I	V	G	Y	V	R	E	A	T	P	R	E	V	E	Q	A	L	E	S	A	V	N	N	A	P	I	W	F	A	T	P	P	A	E	R	A	A	I	L	H	R	A	A	V	L	M	E	S	Q	M	Q	Q	L	I	G	I	L	V	R	E	A	G	K	T
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		I	N	R	E	D	M	D	V	I	N	P	Y	S	L	.	E	V	I	K	K	I	P	A	L	S	R	E	E	A	K	E	A	I	D	T	A	E	K	Y	K	E	V	M	K	N	L	P	I	T	K	R	Y	N	I	L	M	N	I	A	K	Q	I	K	E	K	K	E	E	L	A	K	I	L	A	I	D	A	G	K	P
Template Known Secondary structure												T	T	T		.																								T						T																				T
Template Predicted Secondary structure																.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.											.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	N	A	I	A	E	V	R	E	A	V	D	F	L	H	Y	Y	A	G	Q	V	R	D	D	F	A	.	.	.	.	.	.	.	.	.	.	N	E	T	H	R	P	L	G	P	V	V	C	I	S	P	W	N	F	P	L	A	I	F	T	G	Q	I	A	A	A	L	A	A	G	N	S	V	L	A	K	P	A	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	Q	A	R	V	E	V	E	R	S	I	G	T	F	K	L	A	A	F	Y	V	K	E	H	R	D	E	V	I	P	S	D	D	R	L	I	F	T	R	R	E	P	V	G	I	V	G	A	I	T	P	F	N	F	P	L	N	L	S	A	H	K	I	A	P	A	I	A	T	G	N	V	I	V	H	H	P	S	S
Template Known Secondary structure																																		T	T											S								S	S	S															T	T									T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		806	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.					.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		Q	T	P	L	I	A	A	Q	G	I	A	I	L	L	E	A	.	.	.	.	G	V	P	P	G	V	V	Q	L	L	P	G	R	G	E	T	V	G	A	Q	L	T	G	D	D	R	V	R	G	V	M	F	T	G	S	T	E	V	A	T	L	L	Q	R	N	I	A	S	R	L	D	A	Q	G	R	P	I	P	L	I
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		K	A	P	L	V	C	I	E	L	A	K	I	I	E	N	A	L	K	K	Y	N	V	P	L	G	V	Y	N	L	L	T	G	A	G	E	V	V	G	D	E	I	V	V	N	E	K	V	N	M	I	S	F	T	G	S	S	K	V	G	E	L	I	T	K	K	A	G	F	.	.	.	.	.	.	.	.	K	K	I	A
Template Known Secondary structure		T	S																		T	T			G	G	G						S		T	T	T									T	T								S														S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	G	G	M	N	A	M	I	V	D	S	S	A	L	T	E	Q	V	V	V	D	V	L	A	S	A	F	D	S	A	G	Q	R	C	S	A	L	R	V	L	C	L	Q	D	E	I	A	D	H	T	L	K	M	L	R	G	A	M	A	E	C	R	M	G	N	P	G	R	L	T	T	D	I	G	P	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	G	G	V	N	P	N	I	V	L	K	D	A	D	L	N	K	A	V	N	A	L	I	K	G	S	F	I	Y	A	G	Q	V	C	I	S	V	G	M	I	L	V	D	E	S	I	A	D	K	F	I	E	M	F	V	N	K	A	K	V	L	N	V	G	N	P	L	D	E	K	T	D	V	G	P	L	I	S
Template Known Secondary structure														T	T	S															G	G	G	G		S	T	T	S								G	G	G														T			B	S		T	T	S	T	T		S	B				S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		962	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.		.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		S	E	A	K	A	N	I	E	R	H	I	Q	T	M	R	S	K	G	R	P	V	F	Q	A	V	R	E	N	S	E	D	A	R	E	W	Q	S	G	T	F	V	A	P	T	L	I	E	.	L	D	D	F	A	E	L	Q	K	E	V	F	G	P	V	L	H	V	V	R	Y	N	R	N	Q	L	P	E	L	I	E	Q
Query Conservation																																																	.
Alig confidence																														.	.	.	.	.	.	.	.	.											.																								.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		V	E	H	A	E	W	V	E	K	V	V	E	K	A	I	D	E	G	G	K	L	L	L	G	G	K	R	D	.	.	.	.	.	.	.	.	.	K	A	L	F	Y	P	T	I	L	E	V	D	R	D	N	I	L	C	K	T	E	T	F	A	P	V	I	P	I	I	R	T	N	E	.	.	.	E	E	M	I	D	I
Template Known Secondary structure																		T	T											.	.	.	.	.	.	.	.	.	T	T											T	T	S	G	G	G	T					S	S										.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.										.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.				.	.	.	.	.	.
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	S	G	Y	G	L	T	L	G	V	H	T	R	I	D	E	T	I	A	Q	V	T	G	S	A	H	V	G	N	L	Y	V	N	R	N	M	V	G	A	V	V	G	V	Q	P	F	G	G	E	G	L	S	G	T	G	P	K	A	G	G	P	L	Y	L	Y	R	L	L	A	N	R	P
Query Conservation
Alig confidence																																											.																.
Template Conservation																																											.																.
Template Sequence		A	N	S	T	E	Y	G	L	H	S	A	I	F	T	N	D	I	N	K	S	L	K	F	A	E	N	L	E	F	G	G	V	V	I	N	D	S	S	L	F	R	.	Q	D	N	M	P	F	G	G	V	K	K	S	G	L	G	.	R	E	G	V	K	Y	A	M	E	E	M	S	N	I	K	T
Template Known Secondary structure			T		S	S			S							S												S		S	S					S	S		T	T			.		T	T	S		B			S	G	G	G			S	.		B	S								T
Template Predicted Secondary structure																																											.																.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.