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Job DescriptionP09546
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank44Aligned Residues414
% Identity21%Templatec3lnsD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:benzaldehyde dehydrogenase; PDBTitle: benzaldehyde dehydrogenase, a class 3 aldehyde dehydrogenase, with2 bound nadp+ and benzoate adduct
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   678.680.........690.........700.........710.........720.........730.........740 .........750......
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Query Sequence  EATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI. AEVREAVDFLHYYAGQ
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Template Conservation    
   
  
   
  
   
       
   
      
      
      
 

    
   

      
      
Template Sequence  YLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAH
Template Known Secondary structure 


TTTT
STT


T
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   757..760.... .....770.........780.........790.........800.........810.........820.
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Query Sequence  VRDDFANE. . . . . . . . . . . . . . . THRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEA
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Template Sequence  LDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA
Template Known Secondary structure  TS



GGG
S




SSSTTTT


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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   822.......830.........840.........850.........860.........870.........880.........890.........900.
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Query Sequence  GVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQV
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Template Sequence  FAPEYVAVIQGG. . RDENSHLLSLP. FDFIFFTGSPNVGKVVMQAAAKHL. . . . . . TPVVLELGGKCPLIVLPDADLDQT
Template Known Secondary structure 

TTT



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TT

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   163......170.... .....180..... ....190.........200......... 210.........220.........230...
 
   902.......910.........920.........930.........940.........950.........960.........970.........980.
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Query Sequence  VVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRP
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Template Sequence  VNQLMFGKFINSGQ. TIAPDYLYVHYSVKDALLERLVERV. . . . . KTELPEINSTGKLVTERQVQRLVSLLEAT. . . QGQ
Template Known Secondary structure  GGGG
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GGG.....

STTTT


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   234.....240....... ..250.........260.........270.. .......280.........290.........300. ...
 
   982.......990.........1000........ .1010.........1020.........1030.........1040... ......1050........
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Query Sequence  VFQAVRENSEDAREWQSGTFVAPTLIE. . LDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINA. SGYGLTLGVHTRIDE
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Template Sequence  VLVGSQA. . . . . . . DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEF. . DSVRTAIDQVNKHHPKPLAVYVFGKDMD
Template Known Secondary structure 


.......GGGT

S

TTSGGGSS


SS..S
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S
S
S
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   306...310.. .......320.........330.........340........ .350.........360.........370......
 
   10591060.........1070.........1080.........1090.........1100.........1110.........
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Query Sequence  TIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALA
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Template Sequence  VAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEY. HGHFSYLTFTHKKSVRIVP
Template Known Secondary structure  TS

SS

SGGGG
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GGG

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   377..380.........390.........400.........410....... ..420.........430......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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