Job Description P09546 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 21 Aligned Residues 458 % Identity 27% Template c3ifgH_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:succinate-semialdehyde dehydrogenase (nadp+); PDBTitle: crystal structure of succinate-semialdehyde dehydrogenase from2 burkholderia pseudomallei, part 1 of 2 Resolution 2.70 Å

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		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.				.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		A	L	Q	K	W	Q	A	L	P	M	L	E	Q	P	V	A	.	.	.	A	G	E	M	S	P	V	I	N	P	A	E	P	K	D	I	V	G	Y	V	R	E	A	T	P	R	E	V	E	Q	A	L	E	S	A	V	N	N	A	P	I	W	F	A	T	P	P	A	E	R	A	A	I	L	H	R	A	A	V	L	M
Query Conservation																		.	.	.
Alig confidence																		.	.	.														.
Template Conservation																																		.
Template Sequence		D	P	S	L	L	R	H	Q	A	Y	I	G	G	E	W	Q	A	A	D	S	D	A	T	F	E	V	F	D	P	A	T	G	.	E	S	L	G	T	V	P	K	M	G	A	A	E	T	A	R	A	I	E	A	A	Q	A	A	W	A	G	W	R	M	K	T	A	K	E	R	A	A	I	L	R	R	W	F	D	L	V
Template Known Secondary structure		S	G	G	G	S			S				T	T						T	T									T	T	T		.									B																						S
Template Predicted Secondary structure																																		.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.													.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	Q	M	Q	Q	L	I	G	I	L	V	R	E	A	G	K	T	F	S	N	A	I	A	E	V	R	E	A	V	D	F	L	H	Y	Y	A	G	Q	V	R	D	D	F	A	N	E	.	.	.	.	.	.	.	.	.	.	.	.	T	H	R	P	L	G	P	V	V	C	I	S	P	W	N	F	P	L	A	I	F
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	N	S	D	D	L	A	L	I	L	T	T	E	Q	G	K	P	L	A	E	A	K	G	E	I	A	Y	A	A	S	F	I	E	W	F	A	E	E	G	K	R	V	A	G	D	T	L	P	T	P	D	A	N	K	R	I	V	V	V	K	E	P	I	G	V	C	A	A	I	T	P	W	N	F	P	A	A	M	I
Template Known Secondary structure				T																																						T	T									S	S	T	T																			S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Q	I	A	A	A	L	A	A	G	N	S	V	L	A	K	P	A	E	Q	T	P	L	I	A	A	Q	G	I	A	I	L	L	E	A	G	V	P	P	G	V	V	Q	L	L	P	G	R	G	E	T	V	G	A	Q	L	T	G	D	D	R	V	R	G	V	M	F	T	G	S	T	E	V	A	T	L	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	K	V	G	P	A	L	A	A	G	C	P	I	V	V	K	P	A	E	S	T	P	F	S	A	L	A	M	A	F	L	A	E	R	A	G	V	P	K	G	V	L	S	V	V	I	G	D	P	K	A	I	G	T	E	I	T	S	N	P	I	V	R	K	L	S	F	T	G	S	T	A	V	G	R	L	L	M	A
Template Known Secondary structure												T									S	S																T			B	T	T						B													T	T								S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		866	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	S	R	L	D	A	Q	G	R	P	I	P	L	I	A	E	T	G	G	M	N	A	M	I	V	D	S	S	A	L	T	E	Q	V	V	V	D	V	L	A	S	A	F	D	S	A	G	Q	R	C	S	A	L	R	V	L	C	L	Q	D	E	I	A	D	H	T	L	K	M	L	R	G	A	M	A	E	C	R
Query Conservation
Alig confidence								.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		Q	S	A	P	T	V	.	.	.	.	.	.	K	K	L	T	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	D	A	A	V	E	G	A	I	A	S	K	Y	R	N	N	G	Q	T	C	V	C	T	N	R	F	F	V	H	E	R	V	Y	D	A	F	A	D	K	L	A	A	A	V	S	K	L	K
Template Known Secondary structure			T	G	G	G	T	.	.	.	.	.	.																	T	T															S	G	G	G	G		S	T	T									G	G	G														T	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.			.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		M	G	N	P	G	R	L	T	T	D	I	G	P	V	I	D	S	E	A	K	A	N	I	E	R	H	I	Q	T	M	R	S	K	G	R	P	V	F	Q	A	V	R	E	N	S	E	D	A	R	E	W	Q	S	G	T	F	V	A	P	T	L	I	E	.	.	L	D	D	F	A	E	L	Q	K	E	V	F	G	P	V
Query Conservation																																																																	.	.
Alig confidence																																																	.	.	.	.	.	.											.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		V	G	R	G	T	E	S	G	A	T	L	G	P	L	I	N	E	A	A	V	K	K	V	E	S	H	I	A	D	A	L	A	K	G	A	S	L	M	T	G	G	K	R	H	A	L	G	.	.	.	.	.	.	H	G	F	F	E	P	T	V	L	T	G	V	K	P	D	M	D	V	A	K	E	E	T	F	G	P	L
Template Known Secondary structure		B			T	T	S	T	T			B				S	S																		T								S	B		T	T		.	.	.	.	.	.	T	T		B										T	T	S	G	G	G	T	S				S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.							.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		1024	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	V	R	Y	N	R	N	Q	L	P	E	L	I	E	Q	I	N	A	S	G	Y	G	L	T	L	G	V	H	T	R	I	D	E	T	I	A	Q	V	T	G	S	A	H	V	G	N	L	Y	V	N	R	N	M	V	G	A	V	V	G	V	Q	P	F	G	G	E	G	L	S	G	T	G	P	K	A	G	G	P
Query Conservation
Alig confidence								.	.																																																			.	.															.
Template Conservation								.	.																																																			.	.															.
Template Sequence		A	P	L	F	R	F	.	.	A	S	E	E	E	L	V	R	L	A	N	D	T	E	F	G	L	A	A	Y	L	Y	S	R	D	I	G	R	V	W	R	V	A	E	A	L	E	Y	G	M	V	G	I	N	T	G	L	I	S	N	.	.	E	V	A	P	F	G	G	V	K	Q	S	G	L	G	.	R	E	G	S	H
Template Known Secondary structure								.	.													S	S			S																						S					S		S					.	.	S	S	S		B			S	G	G	G			S	.		B	S	T	T
Template Predicted Secondary structure								.	.																																																			.	.															.
Template SS confidence
		394	.	.	.	.	.			400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.			450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.
		1104	.	.	.	.	.	1110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	L	Y	R	L	L	A	N	R	P	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	I	D	D	Y	V	V	I	K	Y	L	C
Template Known Secondary structure		T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.