|   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | A | A | I | T | A | A | Y | R | R | P | E | T | E | A | V | S | M | L | L | E | Q | A | R | L | P | Q | P | V | A | E | Q | A | H | K | L | A | Y | Q | L | A | D | K | L | R | N | Q | K | N | A | S | G | R | A | G | M | V | Q | G | L | L | Q | E | F | S | L | S | S | Q | E | G | V | A | L | M | C | L | A | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|
Template Sequence |   |
I | P | P | P | F | T | A | P | Y | A | P | D | D | A | E | I | A | A | R | L | L | P | A | S | H | L | S | P | P | Q | E | A | R | I | H | R | T | A | T | R | L | I | E | A | I | R | K | R | R | L | . |
. |
. |
. |
. |
G | G | V | E | D | M | L | R | E | F | A | L | S | T | K | E | G | L | A | L | M | V | L | A | E |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | L | R | I | P | D | K | A | T | R | D | A | L | I | R | D | K | I | S | N | G | N | W | Q | S | H | I | G | R | S | P | S | L | F | V | N | A | A | T | W | G | L | L | F | T | G | K | L | V | S | T | H | N | E | A | S | L | S | R | S | L | N | R | I | I | G | K | S | G | E | P | L | I | R | K | G | V | D | M |
Query Conservation |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | L | L | R | V | P | D | A | R | T | A | D | Q | F | I | E | D | K | L | G | E | G | D | F | I | H | H | E | T | K | S | T | A | F | L | V | N | A | S | A | W | A | A | R | V | I | Q | P | . |
. |
. |
. |
. |
. |
G | E | T | P | D | G | T | I | G | R | L | V | K | R | L | G | A | P | A | V | R | T | A | T | R | Q |
Template Known Secondary structure |   |
 |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T |
| G | G | G |
|
|
|
|
|
|
| T | . | . | . | . | . | . | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | R | L | M | G | E | Q | F | V | T | G | E | T | I | A | E | A | L | A | N | A | R | K | L | E | E | K | G | F | R | Y | S | Y | D | M | L | G | E | A | A | L | T | A | A | D | A | Q | A | Y | M | V | S | Y | Q | Q | A | I | H | A | I | G | K | A | S | N | G | R | G | I | Y | E | G | P | G | I | S | I | K | L |
Query Conservation |   |
|
|
|   |   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
A | M | R | L | M | G | N | H | F | V | L | G | E | T | I | E | Q | A | L | E | R | G | K | P | R | S | G | Q | K | T | R | Y | S | F | D | M | L | G | E | G | A | R | T | A | A | D | A | R | R | Y | F | D | A | Y | A | S | A | I | E | T | I | G | K | A | A | G | N | H | A | L | P | D | R | P | G | I | S | V | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  | S | S |  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|
| S | S |  |  |  |  |
|
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|
| T | T | S | S |
|  |  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
  |
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | L | H | P | R | Y | S | R | A | Q | Y | D | R | V | M | E | E | L | Y | P | R | L | K | S | L | T | L | L | A | R | Q | Y | D | I | G | I | N | I | D | A | E | E | S | D | R | L | E | I | S | L | D | L | L | E | K | L | C | F | E | P | E | L | A | G | W | N | G | I | G | F | V | I | Q | A | Y | Q | K | R | C |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
S | A | L | H | P | R | F | E | A | I | S | R | A | R | V | M | V | E | L | V | P | Q | L | L | D | L | A | Q | R | A | K | A | H | D | L | N | F | T | V | D | A | E | E | A | D | R | L | E | L | S | L | D | V | I | A | A | T | L | A | D | P | S | L | K | G | W | D | G | F | G | L | A | I | Q | A | Y | Q | K | R | A |
Template Known Secondary structure |   |
 |  |  |
| T | T |
| S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T | S | G | G | G | T | T |
|
|
|  |  |  |  |  |  | T | T | B | T | T |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
239 | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . |
  |
  |   |
411 | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | V | I | D | Y | L | I | D | L | A | T | R | S | R | R | R | L | M | I | R | L | V | K | G | A | Y | W | D | S | E | I | K | R | A | Q | M | D | G | L | E | G | Y | P | V | Y | T | R | K | V | Y | T | D | V | S | Y | L | A | C | A | K | K | L | L | A | V | P | N | L | I | Y | P | Q | F | A | T | H | N | A | H |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |
Template Sequence |   |
S | A | V | I | D | Y | V | D | A | L | A | R | A | H | D | R | K | L | M | V | R | L | V | K | G | A | Y | W | D | T | E | I | K | R | A | Q | E | R | G | L | D | G | Y | P | V | F | T | R | K | A | M | T | D | L | N | Y | V | A | C | A | S | K | L | L | A | L | R | P | R | I | F | P | Q | F | A | T | H | N | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
| S | B |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |  |  |  |  |  |  |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
319 | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . |
  |
  |   |
491 | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | |
|
. | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | A | A | I | Y | Q | L | A | G | Q | N | Y | Y | P | G | Q | Y | E | F | Q | C | L | H | G | M | G | E | P | L | Y | E | Q | V | T | G | K | V | A | D | G | K | L | N | R | P | C | . |
. |
R | I | Y | A | P | V | G | T | H | E | T | L | L | A | Y | L | V | R | R | L | L | E | N | G | A | N | T | S | F | V | N |
Query Conservation |   |
  |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
| . | . |
|   |
|   |
|
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |
|
|   |   |   | . | . | . |   |   |   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . |
|   |   |
|   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |
Template Sequence |   |
T | V | A | T | V | L | E | M | A | E | G | S | . |
. |
. |
S | G | F | E | F | Q | R | L | H | G | M | G | E | A | L | Y | E | Q | L | A | K | D | . |
. |
. |
. |
. |
. |
H | A | D | I | A | Y | R | T | Y | A | P | V | G | S | H | R | D | L | L | A | Y | L | V | R | R | L | L | E | N | G | A | N | S | S | F | V | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | S | S | . | . | . | S | S |
|  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
| T | T |
|
|  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
399 | 400 | . | . | . | . | . | . | . | . | . | 410 | |
|
|
. | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
  |
  |   |
569 | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | A | D | T | S | L | P | L | D | E | L | V | A | D | P | V | T | A | V | E | K | L | A | Q | Q | E | G | Q | T | G | L | P | H | P | K | I | P | L | P | R | D | L | Y | G | H | G | R | D | N | S | A | G | L | D | L | A | N | E | H | R | L | A | S | L | S | S | A | L | L | N | S | A | L | Q | K | W | Q | A | L |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | A | A | D | Y | R | V | P | V | P | A | L | L | Q | R | P | A | D | A | I | V | R | P | Q | . |
. |
. |
. |
. |
. |
A | A | A | H | P | R | I | P | L | P | C | D | L | F | A | P | E | R | R | N | S | R | G | V | E | F | G | A | R | T | A | L | D | Q | L | L | T | D | V | K | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  | T |
| T | T | S |
|  |  |  |  | T |
|
|  |  |  |  |  |
| S | G | G | . | . | . | . | . | . | G |
| S |
| T | T | S |
|
| G | G | G | T | T | T | T | T |
|
|
|
|
|
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
649 | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | M | L | E | Q | P | V | A | A | G | E | M | S | P | V | I | N | P | A | E | P | K | D | I | V | G | Y | V | R | E | A | T | P | R | E | V | E | Q | A | L | E | S | A | V | N | N | A | P | I | W | F | A | T | P | P | A | E | R | A | A | I | L | H | R | A | A | V | L | M | E | S | Q | M | Q | Q | L | I | G | I | L |
Query Conservation |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |
|
|
|   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | T | G | D | L | K | P | I | A | D | A | T | P | D | Q | A | H | A | A | V | A | A | A | R | A | G | F | A | G | W | S | R | T | P | A | G | I | R | A | A | A | L | E | Q | A | A | H | L | L | E | S | R | S | A | H | F | I | A | L | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
535 | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . |
  |
  |   |
729 | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | E | A | G | K | T | F | S | N | A | I | A | E | V | R | E | A | V | D | F | L | H | Y | Y | A | G | Q | V | R | D | D | F | A | N | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | H | R | P | L | G | P | V | V | C | I | S | P | W | N | F | P | L | A | I | F | T | G | Q | I | A | A | A | L | A | A |
Query Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
Q | R | E | G | G | K | T | L | D | D | A | L | S | E | L | R | E | A | A | D | F | C | R | Y | Y | A | A | Q | G | R | K | L | F | G | S | E | T | A | M | P | G | P | T | G | E | S | N | A | L | T | M | R | G | R | G | V | F | V | A | I | S | P | W | N | F | P | L | A | I | F | L | G | Q | V | T | A | A | L | M | A |
Template Known Secondary structure |   |
 |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |
|
| S | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
595 | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . |
  |
  |   |
796 | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | S | V | L | A | K | P | A | E | Q | T | P | L | I | A | A | Q | G | I | A | I | L | L | E | A | G | V | P | P | G | V | V | Q | L | L | P | G | R | G | E | T | V | G | A | Q | L | T | G | D | D | R | V | R | G | V | M | F | T | G | S | T | E | V | A | T | L | L | Q | R | N | I | A | S | R | L | D | A | Q | G |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |
|   |   |
|   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |
| . |
|
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |   | . | . | . |   |   |
Template Sequence |   |
G | N | S | V | V | A | K | P | A | E | Q | T | P | R | I | A | R | E | A | V | A | L | L | H | E | A | G | I | P | K | S | A | L | Y | L | V | T | G | D | G | . |
R | I | G | A | A | L | T | A | H | P | D | I | A | G | V | V | F | T | G | S | T | E | V | A | R | S | I | N | R | A | L | A | A | K | . |
. |
. |
D | G |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T | T |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
675 | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | |
. | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | |
|
|
. | 750 |
  |
  |   |
876 | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | I | P | L | I | A | E | T | G | G | M | N | A | M | I | V | D | S | S | A | L | T | E | Q | V | V | V | D | V | L | A | S | A | F | D | S | A | G | Q | R | C | S | A | L | R | V | L | C | L | Q | D | E | I | A | D | H | T | L | K | M | L | R | G | A | M | A | E | C | R | M | G | N | P | G | R | L | T | T | D |
Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|
|   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |
Template Sequence |   |
P | I | V | P | L | I | A | E | T | G | G | I | N | A | M | I | A | D | A | T | A | L | P | E | Q | V | A | D | D | V | V | T | S | A | F | R | S | A | G | Q | R | C | S | A | L | R | L | L | F | V | Q | E | D | V | A | D | R | M | I | E | M | V | A | G | A | A | R | E | L | K | I | G | D | P | S | D | V | A | T | H |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |
| S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| B | S |
| T | T | S | T | T |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
751 | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 |
  |
  |   |
956 | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | P | V | I | D | S | E | A | K | A | N | I | E | R | H | I | Q | T | M | R | S | K | G | R | P | V | F | Q | A | V | R | E | N | S | E | D | A | R | E | W | Q | S | G | T | F | V | A | P | T | L | I | E | L | D | D | F | A | E | L | Q | K | E | V | F | G | P | V | L | H | V | V | R | Y | N | R | N | Q | L | P |
Query Conservation |   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|
|
Template Sequence |   |
V | G | P | V | I | D | V | E | A | K | Q | R | L | D | A | H | I | A | R | M | K | T | E | A | R | L | H | F | A | G | P | A | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | G | C | F | V | A | P | H | I | F | E | L | T | E | A | G | Q | L | T | E | E | V | F | G | P | I | L | H | V | V | R | Y | R | P | E | N | L | E |
Template Known Secondary structure |   |
B |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | S | S | S |
|
|
|
|  |  |  |  |
| S | S | G | G | G |
|
| S |
|
|
| S | S |  |  |  |  |  |  |  |
| G | G | G |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
831 | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . |
  |
  |   |
1036 | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | I | E | Q | I | N | A | S | G | Y | G | L | T | L | G | V | H | T | R | I | D | E | T | I | A | Q | V | T | G | S | A | H | V | G | N | L | Y | V | N | R | N | M | V | G | A | V | V | G | V | Q | P | F | G | G | E | G | L | S | G | T | G | P | K | A | G | G | P | L | Y | L | Y | R | L | L | A | N | R | P | E |
Query Conservation |   |
|
|
|
|   |
|
|   |
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |
|   |
|
|   |
|   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |
|   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |   |
|
|   |
|   |   |   |
|
|
|
|   |
|   |
|
|   |
|   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |
|
Template Sequence |   |
R | V | L | R | A | I | E | R | T | G | Y | G | L | T | L | G | V | H | S | R | I | D | D | S | I | E | A | I | I | D | R | V | Q | V | G | N | I | Y | V | N | R | N | M | I | G | A | V | V | G | V | Q | P | F | G | G | N | G | L | S | G | T | G | P | K | A | G | G | P | H | Y | L | A | R | F | A | T | E | Q | T | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|
|
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  | S | S |
| S |
|
|
|
| T | T | T | S |
| B |
|
|
| G | G | G | B |
|
|
|
| B | T | S | T | T | S | G | G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
902 | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . |
  |
  |   |
1116 | . | . | . | 1120 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | L | A | V | T | L | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|
Template Sequence |   |
T | I | N | T | A | A | A | G |
Template Known Secondary structure |   |
 |  |  |
| G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
982 | . | . | . | . | . | . | . |
  |