Job Description P09546 Confidence 84.88% Date Wed Jan 25 15:20:14 GMT 2012 Rank 56 Aligned Residues 131 % Identity 15% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																	.	.	.	.	320	.	.	.
Predicted Secondary structure																						.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	.	.	.	.	Y	D	M	L	G	E	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S	Y	Q	Q	A	I	H	A	I	G	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	R	G	I	Y	E	G
Query Conservation																						.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P
Template Known Secondary structure																T	T																		T		T	T																			T										S	S		S				S	B	S	S				T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.																			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.								.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Query Sequence		P	G	I	S	I	K	L	S	A	L	H	P	R	Y	S	R	A	Q	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	.	.	.	.	.	.	.	S	D	R	L	E
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		D	G	.	.	.	.	.	.	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I
Template Known Secondary structure		T	S	.	.	.	.	.	.		B						S	S	S	S		S	S												T																									T									S	S	S	S			T	T
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		142	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	D	L	L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		T	G	Q	E	A	V	E	R	F	L	N	L	.	.	.	Y	D	S	E	H	N	G	I	T	M
Template Known Secondary structure			S									T	T	.	.	.	S		S	T	T
Template Predicted Secondary structure														.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions