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Job DescriptionP09546
Confidence100.00%DateWed Jan 25 15:20:14 GMT 2012
Rank28Aligned Residues475
% Identity20%Templatec2vroB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   648.650..... ....660.........670.........680.........690.........700.........710.........720.....
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Query Sequence  LPMLEQPV. . AAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLI
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Template Sequence  KNHVAGQWIAGTGAGITLTDPVTG. VALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYY
Template Known Secondary structure 
TT

SSS

TTT
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TT

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T
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   6...10.........20......... 30.........40.........50.........60.........70.........80....
 
   726...730.........740.........750.........760..... ....770.........780....
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Query Sequence  GILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANET. . . . . . . . . . . . . . . . . . . . . HRPLGPVVCISPWNFPLAI
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Template Sequence  AIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWG
Template Known Secondary structure 


TT
S
S
STTS

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TT
TT
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   785....790.........800.........810...... ...820.........830.........840.........850.........860...
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Query Sequence  FTGQIAAALAAGNSVLAKPAEQTPLIAAQGIA. ILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLL
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Template Sequence  LWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSS. . . AGLLDQIRSFDVVSFTGSADTAATL
Template Known Secondary structure  TT



GGGT
S
TTS

S

...TTTGGG

TT
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   165....170.........180.........190.........200.........210...... ...220.........230.........240.
 
   864.....870.........880.........890....... ..900.........910.........920.........930........
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Query Sequence  QRNIASRLDAQGRPIPLIAETGGMNAMIVDSSAL. . . . . TEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLR
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Template Sequence  RAHPAF. . . . VQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALK
Template Known Secondary structure  TS....TT






TT

TTSGGGG

TT
GGG
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   242..... ..250.........260.........270.........280.........290.........300.........310.......
 
   939940.........950.........960.........970.........980.........990.........1000........ .1010....
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Query Sequence  GAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIE. . . . LDDFAE
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Template Sequence  AKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLID. ADANIAACVAPHLFVVNDPDNATLL
Template Known Secondary structure  TT

BB
TTSTT
SB


S
TTS
TTS

BS.S
TTTS





S
TTT
SST
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   318.320.........330.........340.........350.........360.........370. ........380.........390......
 
   1015....1020.........1030. ........1040.........1050.........1060.........1070......... 1080...
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Query Sequence  LQKEVFGPVLHVVRYNR. . NQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMV. . . . . . . . . GAVV
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Template Sequence  HDVEVFGPVASVAPYRVTALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVM
Template Known Secondary structure  TT



SS




TTTTSS
S
TTT
GGGTTT


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   397..400.........410.........420.........430.........440.........450.........460.........470......
 
   1084.....1090.........1100.........1110.........1120.........1130.
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Query Sequence  GVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAKYPV
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Template Sequence  PMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAASAAIGTLTQATHW
Template Known Secondary structure  TTS

SGGG
S

SGGGGGGGGTT
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   481........490.........500.........510.........520........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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