Job Description P09546 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 49 Aligned Residues 291 % Identity 29% Template c2ekgB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:proline dehydrogenase/delta-1-pyrroline-5-carboxylate PDBTitle: structure of thermus thermophilus proline dehydrogenase inactivated by2 n-propargylglycine Resolution 1.90 Å

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		225	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	A	S	L	S	R	S	L	N	R	.	I	I	G	K	S	G	E	P	L	I	R	K	G	V	D	M	A	M	R	L	M	G	E	Q	F	V	T	G	E	T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	Y	D	M	L	G	E	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		H	M	N	L	D	L	A	Y	R	S	F	V	L	G	V	A	G	H	P	Q	V	E	R	L	I	K	H	R	A	K	G	L	V	R	R	Y	V	A	G	E	T	L	E	E	A	L	K	A	A	E	A	L	E	R	E	G	V	H	A	I	L	D	L	L	G	E	M	V	R	T	E	E	E	A	R	A	F	Q	R	G
Template Known Secondary structure																			S																			S			S	S														T	T										S				S
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	Q	A	I	H	A	I	G	K	A	S	N	G	R	G	I	Y	E	G	P	G	I	S	I	K	L	S	A	L	H	P	R	Y	S	R	A	Q	Y	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	S	D	R	L	E	I	S	L	D	L
Query Conservation
Alig confidence																		.	.	.	.	.	.					.										.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.					.										.	.	.	.	.	.	.
Template Sequence		L	L	E	L	V	W	A	L	A	G	K	P	W	P	K	Y	.	.	.	.	.	.	I	S	L	L	.	T	Q	L	G	L	D	L	S	E	.	.	.	.	.	.	.	D	L	A	L	A	L	L	R	E	V	L	R	E	A	E	P	R	G	V	F	V	R	L	D	M	E	D	S	P	R	V	E	A	T	L	R	L
Template Known Secondary structure										T	T		S	S				.	.	.	.	.	.					.	G	G	G	T	T	T	T			.	.	.	.	.	.	.															G	G	G	T										G	G	G
Template Predicted Secondary structure																		.	.	.	.	.	.					.										.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.		100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I	Q	A	Y	Q	K	R	C	P	L	V	I	D	Y	L	I	D	L	A	T	R	S	R	R	R	L	M	I	R	L	V	K	G	A	Y	W	D	S	E	I	K	R	A	Q	M	D	G	L	E	G	Y	P	V	Y	T	R	K	V	Y	T	D
Query Conservation
Alig confidence									.	.	.	.																											.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																											.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	A	L	R	E	E	.	.	.	.	G	F	S	Q	V	G	I	V	L	Q	S	Y	L	Y	R	T	E	K	D	L	L	D	L	L	P	Y	.	.	.	.	.	.	R	P	N	L	R	L	V	K	G	A	Y	R	E	P	K	.	.	.	.	.	.	.	.	.	.	.	E	V	A	F	P	D	K	R	L	I	D
Template Known Secondary structure								T	.	.	.	.	T			S							T	T	B	T	T									G	G	G	.	.	.	.	.	.											S				T	.	.	.	.	.	.	.	.	.	.	.	T	T	B
Template Predicted Secondary structure									.	.	.	.																											.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.												.	.	.	.	.	200	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		V	S	Y	L	A	C	A	K	K	L	L	A	V	P	N	L	I	Y	P	Q	F	A	T	H	N	A	H	T	L	A	A	I	Y	Q	L	A	G	Q	N	Y	.	Y	P	G	Q	Y	E	F	Q	C	L	H	G	M	G	E	P	L	Y	E	Q	V	T	G	K	V	A	D	G	K	L	N	R	P	C	R	I	Y	A	P
Query Conservation																																										.
Alig confidence															.	.																										.																									.	.	.	.	.	.
Template Conservation															.	.																																																			.	.	.	.	.	.
Template Sequence		A	E	Y	L	H	L	G	K	L	A	L	K	E	.	.	G	L	Y	V	A	F	A	T	H	D	P	R	I	I	A	E	L	K	R	Y	T	E	A	M	G	I	P	R	S	R	F	E	F	Q	F	L	Y	G	V	R	P	E	E	Q	R	R	L	A	R	E	.	.	.	.	.	.	G	Y	T	V	R	A	Y	V	P
Template Known Secondary structure															.	.	T																							T	T			G	G	G							T	T	S	S										T	.	.	.	.	.	.	T
Template Predicted Secondary structure															.	.																																																			.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	H	E	T	L	L	A	Y	L	V	R	R	L	L	E	N
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		Y	G	R	.	.	D	W	Y	P	Y	L	T	R	R	I	A	E	R
Template Known Secondary structure			S	T	.	.	T										T
Template Predicted Secondary structure					.	.
Template SS confidence
		278	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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