Job Description P09546 Confidence 100.00% Date Wed Jan 25 15:20:14 GMT 2012 Rank 2 Aligned Residues 514 % Identity 99% Template c1k87A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:proline dehydrogenase; PDBTitle: crystal structure of e.coli puta (residues 1-669) Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	S	V	S	R	A	A	I	T	A	A	Y	R	R	P	E	T	E	A	V	S	M	L	L	E	Q	A	R	L	P	Q	P	V	A	E	Q	A	H	K	L	A	Y	Q	L	A	D	K	L	R	N	Q	K	N	A	S	G	R	A	G	M	V	Q	G	L	L	Q	E	F	S	L	S	S	Q	E	G	V	A	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	S	V	S	R	A	A	I	T	A	A	Y	R	R	P	E	T	E	A	V	S	M	L	L	E	Q	A	R	L	P	Q	P	V	A	E	Q	A	H	K	L	A	Y	Q	L	A	D	K	L	R	N	Q	K	N	A	S	G	R	A	G	M	V	Q	G	L	L	Q	E	F	S	L	S	S	Q	E	G	V	A	L	M
Template Known Secondary structure													T	T	T																																					T	T	T	T														T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	A	E	A	L	L	R	I	P	D	K	A	T	R	D	A	L	I	R	D	K	I	S	N	G	N	W	Q	S	H	I	G	R	S	P	S	L	F	V	N	A	A	T	W	G	L	L	F	T	G	K	L	V	S	T	H	N	E	A	S	L	S	R	S	L	N	R	I	I	G	K	S	G	E	P	L	I	R	K
Query Conservation
Alig confidence																														.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		C	L	A	E	A	L	L	R	I	P	D	K	A	T	R	D	A	L	I	R	D	K	I	S	N	G	N	R	.	.	.	.	.	.	S	P	S	L	F	V	N	A	A	T	W	G	L	L	F	T	G	N	E	A	S	.	.	.	.	.	.	L	S	R	S	L	N	R	I	I	G	K	S	G	E	P	L	I	R	K
Template Known Secondary structure									T	S	S												T	T	T	T	T			.	.	.	.	.	.			T	T	T	T	S	T	T						S							.	.	.	.	.	.									T	T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	D	M	A	M	R	L	M	G	E	Q	F	V	T	G	E	T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	Y	D	M	L	G	E	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S	Y	Q	Q	A	I	H	A	I	G	K	A	S	N	G	R	G	I	Y	E	G	P	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	D	M	A	M	R	L	M	G	E	Q	F	V	T	G	E	T	I	A	E	A	L	A	N	A	R	K	L	E	E	K	G	F	R	Y	S	Y	D	M	L	G	E	A	A	L	T	A	A	D	A	Q	A	Y	M	V	S	Y	Q	Q	A	I	H	A	I	G	K	A	S	N	G	R	G	I	Y	E	G	P	G	I
Template Known Secondary structure												G	G	G		S	B	S	S													T	T	T														S																							S	S						S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	K	L	S	A	L	H	P	R	Y	S	R	A	Q	Y	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	S	D	R	L	E	I	S	L	D	L	L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I	Q	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	K	L	S	A	L	H	P	R	Y	S	R	A	Q	Y	D	R	V	M	E	E	L	Y	P	R	L	K	S	L	T	L	L	A	R	Q	Y	D	I	G	I	N	I	D	A	E	E	A	D	R	L	E	I	S	L	D	L	L	E	K	L	C	F	E	P	E	L	A	G	W	N	G	I	G	F	V	I	Q	A	Y
Template Known Secondary structure					G	G	G	T	S	T	T	G	G	G																									T										G	G	G												T	T		G	G	G	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	R	C	P	L	V	I	D	Y	L	I	D	L	A	T	R	S	R	R	R	L	M	I	R	L	V	K	G	A	Y	W	D	S	E	I	K	R	A	Q	M	D	G	L	E	G	Y	P	V	Y	T	R	K	V	Y	T	D	V	S	Y	L	A	C	A	K	K	L	L	A	V	P	N	L	I	Y	P	Q	F	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	R	C	P	L	V	I	D	Y	L	I	D	L	A	T	R	S	R	R	R	L	M	I	R	L	V	K	G	A	Y	W	D	S	E	I	K	R	A	Q	M	D	G	L	E	G	Y	P	V	Y	T	R	K	V	Y	T	D	V	S	Y	L	A	C	A	K	K	L	L	A	V	P	N	L	I	Y	P	Q	F	A	T
Template Known Secondary structure		B	T	T															T	T	S										S													T		S	S		S	B		S	S																	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	A	H	T	L	A	A	I	Y	Q	L	A	G	Q	N	Y	Y	P	G	Q	Y	E	F	Q	C	L	H	G	M	G	E	P	L	Y	E	Q	V	T	G	K	V	A	D	G	K	L	N	R	P	C	R	I	Y	A	P	V	G	T	H	E	T	L	L	A	Y	L	V	R	R	L	L	E	N	G	A	N	T	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	N	A	H	T	L	A	A	I	Y	Q	L	A	G	Q	N	Y	Y	P	G	Q	Y	E	F	Q	C	L	H	G	M	G	E	P	L	Y	E	Q	V	T	G	K	V	A	D	G	K	L	N	R	P	C	R	I	Y	A	P	V	G	T	H	E	T	L	L	A	Y	L	V	R	R	L	L	E	N	G	A	N	T	S	F
Template Known Secondary structure														T		S	S			G	G	G							T	T	T	S					T	T	T	S	S		G	G	G	T															G	G	G	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	R	I	A	D	T	S	L	P	L	D	E	L	V	A	D	P	V	T	A	V	E	K	L	A	Q	Q	E	G	Q	T	G	L	P	H	P	K	I	P	L	P	R	D	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	R	I	A	D	T	S	L	P	L	D	E	L	V	A	D	P	V	T	A	V	E	K	L	A	Q	Q	E	G	Q	T	G	L	P	H	P	K	I	P	L	P	R	D	L	Y
Template Known Secondary structure					T	T		T	T	S						T															S	S	S	S				T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.