Email l.a.kelley@imperial.ac.uk Description P15069 Date Thu Jan 5 11:34:32 GMT 2012 Unique Job ID f64c5a298b28782e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1z6na1 41.0 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 2 c3pwxB_ 36.0 11 PDB header:structural protein Chain: B: PDB Molecule:putative flagellar hook-associated protein; PDBTitle: structure of putative flagellar hook-associated protein from vibrio2 parahaemolyticus 3 c2kujA_ 32.3 75 PDB header:antimicrobial protein Chain: A: PDB Molecule:acanthaporin; PDBTitle: the solution structure of the dimeric acanthaporin 4 d2f8aa1 28.7 0 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 5 d1mqsa_ 25.9 6 Fold:Sec1/munc18-like (SM) proteins Superfamily:Sec1/munc18-like (SM) proteins Family:Sec1/munc18-like (SM) proteins 6 c2he3A_ 21.4 5 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 2; PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2) 7 d1fuia1 21.3 24 Fold:Reductase/isomerase/elongation factor common domain Superfamily:FucI/AraA C-terminal domain-like Family:L-fucose isomerase, C-terminal domain 8 d1v9wa_ 19.7 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like 9 d1udxa1 19.7 28 Fold:Obg-fold Superfamily:Obg GTP-binding protein N-terminal domain Family:Obg GTP-binding protein N-terminal domain 10 c2ehhE_ 18.8 19 PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus 11 d1lnza1 18.7 17 Fold:Obg-fold Superfamily:Obg GTP-binding protein N-terminal domain Family:Obg GTP-binding protein N-terminal domain 12 c3emxB_ 18.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from aeropyrum pernix 13 c2c49A_ 17.7 26 PDB header:transferase Chain: A: PDB Molecule:sugar kinase mj0406; PDBTitle: crystal structure of methanocaldococcus jannaschii2 nucleoside kinase - an archaeal member of the ribokinase3 family 14 c2hyxA_ 17.7 5 PDB header:unknown function Chain: A: PDB Molecule:protein dipz; PDBTitle: structure of the c-terminal domain of dipz from mycobacterium2 tuberculosis 15 d1m3va1 17.5 50 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 16 d2j9ga2 17.0 25 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 17 d2b5ea1 16.0 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 18 d1ulza2 15.8 21 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 19 d1w96a2 15.7 17 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 20 d1woua_ 15.2 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like 21 c3qdnA_ not modelled 14.8 9 PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin protein; PDBTitle: putative thioredoxin protein from salmonella typhimurium 22 c3bf5A_ not modelled 14.6 11 PDB header:transferase Chain: A: PDB Molecule:ribokinase related protein; PDBTitle: crystal structure of putative ribokinase (10640157) from thermoplasma2 acidophilum at 1.91 a resolution 23 c3b1qD_ not modelled 14.1 29 PDB header:transferase Chain: D: PDB Molecule:ribokinase, putative; PDBTitle: structure of burkholderia thailandensis nucleoside kinase (bthnk) in2 complex with inosine 24 d1epua_ not modelled 13.8 26 Fold:Sec1/munc18-like (SM) proteins Superfamily:Sec1/munc18-like (SM) proteins Family:Sec1/munc18-like (SM) proteins 25 d1o73a_ not modelled 13.7 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 26 d1nhoa_ not modelled 12.6 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 27 c3cynC_ not modelled 12.5 5 PDB header:oxidoreductase Chain: C: PDB Molecule:probable glutathione peroxidase 8; PDBTitle: the structure of human gpx8 28 c3me5A_ not modelled 12.4 63 PDB header:transferase Chain: A: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: crystal structure of putative dna cytosine methylase from shigella2 flexneri 2a str. 301 29 d1st6a4 not modelled 12.1 12 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 30 d2gs4a1 not modelled 11.5 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 31 c2l5lA_ not modelled 11.2 14 PDB header:transport protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of thioredoxin from bacteroides vulgatus 32 c3ia1A_ not modelled 10.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:thio-disulfide isomerase/thioredoxin; PDBTitle: crystal structure of thio-disulfide isomerase from thermus2 thermophilus 33 d1vl6a2 not modelled 10.7 26 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Malic enzyme N-domain 34 d1j08a2 not modelled 10.5 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 35 d2fy6a1 not modelled 10.2 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 36 c3fkfC_ not modelled 10.2 9 PDB header:oxidoreductase Chain: C: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: thiol-disulfide oxidoreductase from bacteroides fragilis nctc 9343 37 c2l57A_ not modelled 10.2 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens 38 c3fvwA_ not modelled 10.1 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. 39 c2vimA_ not modelled 10.1 8 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: x-ray structure of fasciola hepatica thioredoxin 40 c1ylaB_ not modelled 10.0 15 PDB header:ligase Chain: B: PDB Molecule:ubiquitin-conjugating enzyme e2-25 kda; PDBTitle: ubiquitin-conjugating enzyme e2-25 kda (huntington interacting protein2 2) 41 c3go6B_ not modelled 10.0 27 PDB header:transferase Chain: B: PDB Molecule:ribokinase rbsk; PDBTitle: crystal structure of m. tuberculosis ribokinase (rv2436) in2 complex with ribose and amp-pnp 42 d2dcna1 not modelled 9.9 22 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:Ribokinase-like 43 c3dwvB_ not modelled 9.9 9 PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione peroxidase-like protein; PDBTitle: glutathione peroxidase-type tryparedoxin peroxidase,2 oxidized form 44 d1xwaa_ not modelled 9.8 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 45 c2h2yA_ not modelled 9.7 6 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme; PDBTitle: crystal structure of ubiquitin conjugating enzyme e2 from2 plasmodium falciparum 46 c3lhxA_ not modelled 9.6 21 PDB header:transferase Chain: A: PDB Molecule:ketodeoxygluconokinase; PDBTitle: crystal structure of a ketodeoxygluconokinase (kdgk) from2 shigella flexneri 47 c3kp8A_ not modelled 9.6 10 PDB header:oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: the thioredoxin-like domain of a vkor homolog from2 synechococcus sp. 48 d1dn1a_ not modelled 9.5 17 Fold:Sec1/munc18-like (SM) proteins Superfamily:Sec1/munc18-like (SM) proteins Family:Sec1/munc18-like (SM) proteins 49 c3lwaA_ not modelled 9.5 15 PDB header:isomerase Chain: A: PDB Molecule:secreted thiol-disulfide isomerase; PDBTitle: the crystal structure of a secreted thiol-disulfide2 isomerase from corynebacterium glutamicum to 1.75a 50 c2dmlA_ not modelled 9.3 9 PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a6; PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a6 51 d2djja1 not modelled 9.1 5 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 52 c2p31B_ not modelled 9.1 14 PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione peroxidase 7; PDBTitle: crystal structure of human glutathione peroxidase 7 53 c2ywiA_ not modelled 9.0 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus 54 c2e0qA_ not modelled 8.9 8 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of k53e thioredoxin from sulfolobus2 tokodaii strain7 55 d1i5ga_ not modelled 8.8 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 56 d1t6ex_ not modelled 8.8 19 Fold:Acid proteases Superfamily:Acid proteases Family:Pepsin-like 57 d1y76a1 not modelled 8.8 22 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 58 d2akja4 not modelled 8.7 24 Fold:Nitrite and sulphite reductase 4Fe-4S domain-like Superfamily:Nitrite and sulphite reductase 4Fe-4S domain-like Family:Nitrite and sulphite reductase 4Fe-4S domain-like 59 c3ha9A_ not modelled 8.6 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized thioredoxin-like protein; PDBTitle: the 1.7a crystal structure of a thioredoxin-like protein from2 aeropyrum pernix 60 c1s6xA_ not modelled 8.5 33 PDB header:toxin Chain: A: PDB Molecule:kvap channel; PDBTitle: solution structure of vstx 61 c2wx4C_ not modelled 8.4 17 PDB header:structural protein Chain: C: PDB Molecule:decapping protein 1; PDBTitle: asymmetric trimer of the drosophila melanogaster dcp1 c-2 terminal domain 62 d1beta_ not modelled 8.2 38 Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Neurotrophin 63 c3hypB_ not modelled 8.2 9 PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of bacteroides fragilis trxp_s105g mutant 64 c3h8qB_ not modelled 8.1 17 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin reductase 3; PDBTitle: crystal structure of glutaredoxin domain of human thioredoxin2 reductase 3 65 d1jb0j_ not modelled 8.0 19 Fold:Single transmembrane helix Superfamily:Subunit IX of photosystem I reaction centre, PsaJ Family:Subunit IX of photosystem I reaction centre, PsaJ 66 c3fxaA_ not modelled 8.0 23 PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution 67 c3pp5A_ not modelled 8.0 17 PDB header:structural protein Chain: A: PDB Molecule:brk1; PDBTitle: high-resolution structure of the trimeric scar/wave complex precursor2 brk1 68 d1uj4a1 not modelled 7.9 24 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 69 d1qgva_ not modelled 7.9 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:spliceosomal protein U5-15Kd 70 c3s5oA_ not modelled 7.8 14 PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial; PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate 71 c3r74B_ not modelled 7.8 18 PDB header:lyase, biosynthetic protein Chain: B: PDB Molecule:anthranilate/para-aminobenzoate synthases component i; PDBTitle: crystal structure of 2-amino-2-desoxyisochorismate synthase (adic)2 synthase phze from burkholderia lata 383 72 d1lk5a1 not modelled 7.8 21 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 73 c2dj0A_ not modelled 7.8 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:thioredoxin-related transmembrane protein 2; PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-related transmembrane protein 2 74 c3hz4A_ not modelled 7.7 18 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from methanosarcina mazei 75 c3ij2B_ not modelled 7.6 38 PDB header:hormone/protein binding Chain: B: PDB Molecule:beta-nerve growth factor; PDBTitle: ligand-receptor structure 76 d1m0sa1 not modelled 7.5 14 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 77 d1rpua_ not modelled 7.5 44 Fold:Tombusvirus P19 core protein, VP19 Superfamily:Tombusvirus P19 core protein, VP19 Family:Tombusvirus P19 core protein, VP19 78 c1rpuA_ not modelled 7.5 44 PDB header:rna binding protein/rna Chain: A: PDB Molecule:19 kda protein; PDBTitle: crystal structure of cirv p19 bound to sirna 79 d1o8xa_ not modelled 7.5 9 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 80 d1fp1d1 not modelled 7.4 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Plant O-methyltransferase, N-terminal domain 81 c1xbsA_ not modelled 7.4 27 PDB header:transcription, cell cycle Chain: A: PDB Molecule:dim1-like protein; PDBTitle: crystal structure of human dim2: a dim1-like protein 82 c2nwhA_ not modelled 7.4 21 PDB header:signaling protein,transferase Chain: A: PDB Molecule:carbohydrate kinase; PDBTitle: carbohydrate kinase from agrobacterium tumefaciens 83 c1v98A_ not modelled 7.4 14 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure analysis of thioredoxin from thermus thermophilus 84 c2vc6A_ not modelled 7.3 19 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound 85 c2diyA_ not modelled 7.2 8 PDB header:protein binding Chain: A: PDB Molecule:thioredoxin-like protein 2; PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-like protein 2 86 d2elba1 not modelled 7.2 11 Fold:BAR/IMD domain-like Superfamily:BAR/IMD domain-like Family:BAR domain 87 c1lnzA_ not modelled 7.0 17 PDB header:cell cycle Chain: A: PDB Molecule:spo0b-associated gtp-binding protein; PDBTitle: structure of the obg gtp-binding protein 88 c2vocA_ not modelled 7.0 9 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: thioredoxin a active site mutants form mixed disulfide2 dimers that resemble enzyme-substrate reaction3 intermediate 89 d2gyqa1 not modelled 7.0 15 Fold:Ferritin-like Superfamily:Ferritin-like Family:YciF-like 90 c3etnD_ not modelled 6.8 4 PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution 91 c3dxbE_ not modelled 6.8 14 PDB header:splicing, transcription Chain: E: PDB Molecule:thioredoxin n-terminally fused to puf60(uhm); PDBTitle: structure of the uhm domain of puf60 fused to thioredoxin 92 d1bndb_ not modelled 6.7 38 Fold:Cystine-knot cytokines Superfamily:Cystine-knot cytokines Family:Neurotrophin 93 d2ucza_ not modelled 6.7 19 Fold:UBC-like Superfamily:UBC-like Family:UBC-related 94 d2b5xa1 not modelled 6.6 10 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 95 c2e7pC_ not modelled 6.5 19 PDB header:electron transport Chain: C: PDB Molecule:glutaredoxin; PDBTitle: crystal structure of the holo form of glutaredoxin c1 from populus2 tremula x tremuloides 96 c2j6pF_ not modelled 6.5 20 PDB header:oxidoreductase Chain: F: PDB Molecule:sb(v)-as(v) reductase; PDBTitle: structure of as-sb reductase from leishmania major 97 d1zmaa1 not modelled 6.5 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 98 c1t00A_ not modelled 6.5 9 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: the structure of thioredoxin from s. coelicolor 99 d2ifqa1 not modelled 6.4 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase