Return to main results Retrieve Phyre Job Id

Job DescriptionP33607
Confidence2.09%DateThu Jan 5 11:52:25 GMT 2012
Rank40Aligned Residues13
% Identity31%Templatec3bwrC_
PDB info PDB header:viral proteinChain: C: PDB Molecule:capsid protein vp1; PDBTitle: sv40 vp1 pentamer in complex with gm1 oligosaccharide
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   229230.........240.
Predicted Secondary structure 
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Query Sequence  KSAQLPLQTWLAD
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Template Conservation   
  



 
 

Template Sequence  KDNAYPVECWVPD
Template Known Secondary structure  STTTSBTTT
Template Predicted Secondary structure 







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   199200.........210.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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