Return to main results Retrieve Phyre Job Id

Job DescriptionP33607
Confidence2.07%DateThu Jan 5 11:52:25 GMT 2012
Rank43Aligned Residues11
% Identity18%Templatec1ceuA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240....
Predicted Secondary structure 

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Query Sequence  PLQTWLADAMA
Query Conservation 


 


 
  
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Template Conservation 
  

  
 

Template Sequence  PYNDWTLELLE
Template Known Secondary structure  TTS
Template Predicted Secondary structure 
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   14.....20....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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