Job Description P0ABC7 Confidence 4.04% Date Thu Jan 5 11:15:10 GMT 2012 Rank 77 Aligned Residues 60 % Identity 8% Template d2cjra1 SCOP info Nucleocapsid protein dimerization domain Nucleocapsid protein dimerization domain Coronavirus nucleocapsid protein Resolution 2.50

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		L	G	G	L	G	G	G	K	G	T	G	S	G	G	G	S	S	S	Q	G	P	.	.	.	.	R	P	Q	L	G	G	R	V	V	T	I	A	A	A	A	I	V	I	I	W	A	A	S	G	F	Y	T	I	K	E	A	E	R	G	V	V	T	R	F
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		V	T	Q	A	F	G	R	R	G	P	E	Q	T	Q	G	N	F	G	D	Q	D	L	I	R	Q	G	T	D	Y	K	H	W	P	Q	I	A	Q	F	A	P	S	A	S	A	F	F	G	M	S	R	I	G	M	E	V	T	P	S	G	T	W	L	T	Y
Template Known Secondary structure											S	S	T	T	S			B									G	G	G	S	T	T						T	T	S									T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions