Job Description P0ABC7 Confidence 3.73% Date Thu Jan 5 11:15:10 GMT 2012 Rank 88 Aligned Residues 89 % Identity 10% Template c3lhkA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative dna binding protein mj0014; PDBTitle: crystal structure of putative dna binding protein from2 methanocaldococcus jannaschii. Resolution 2.20 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	G	V	I	G	K	Y	T	M	D	R	I	L	T	E	G	R	T	V	I	R	S	D	T	Q	R	E	L	E	E	T	I	R	P	Y	D	M	G	I	T	L	L	D	V	N	F	Q	A	A	R	P	P	E	E	V	K	A	A	F	D	D	A	I	A	A	R	E	N	E	Q	Q	Y	I	R	E	A	E	A
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		K	L	L	K	X	V	X	N	R	K	V	E	K	V	I	I	A	Y	P	D	R	L	T	R	F	G	F	E	T	L	K	E	F	F	K	S	Y	.	.	G	T	E	I	V	I	I	N	K	K	H	K	T	P	Q	E	E	L	V	E	D	L	I	T	I	V	S	H	F	A	G	K	L	Y	G	X	H	S	H	K	Y
Template Known Secondary structure									T	T								S	S						S	S												T	.	.	T						S		S	S																										T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		271	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	N	E	V	Q	P	R	A	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	L	T	K	T	V	K	E	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions