Job Description P0ABC7 Confidence 4.41% Date Thu Jan 5 11:15:10 GMT 2012 Rank 66 Aligned Residues 105 % Identity 11% Template c2gd5B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:charged multivesicular body protein 3; PDBTitle: structural basis for budding by the escrtiii factor chmp3 Resolution 2.80 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	A	A	R	P	P	E	E	V	K	A	A	F	D	D	A	I	A	A	R	E	N	E	Q	Q	Y	I	R	E	A	E	A	Y	T	N	E	V	Q	P	R	A	N	G	Q	A	Q	R	I	L	E	E	A	R	A	Y	K	A	Q	T	I	L	E	A	Q	G	E	V	A	R	F	A	K	L	L	P	E	Y	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	E	K	P	P	K	E	L	V	N	E	W	S	L	K	I	R	K	E	X	R	V	V	D	R	Q	I	R	D	I	Q	R	E	E	E	K	V	K	R	S	V	K	D	A	A	K	K	G	Q	K	D	V	C	I	V	L	A	K	E	X	I	R	S	R	K	A	V	S	K	L	Y	A	S	K	A	H	X	N	S
Template Known Secondary structure		S						T	T																																								T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	I	T	R	E	R	L	Y	I	E	T	M	E	K	V	L	G	N	T	R	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	X	G	X	K	N	Q	L	A	V	L	R	V	A	G	S	L	Q	K	S	T	E	V	X
Template Known Secondary structure																S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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