Job Description P77579 Confidence 1.11% Date Thu Jan 5 12:30:44 GMT 2012 Rank 91 Aligned Residues 81 % Identity 15% Template d2vv5a3 SCOP info Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), transmembrane region Mechanosensitive channel protein MscS (YggB), transmembrane region Resolution 3.45

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	P	S	T	F	I	G	A	L	I	I	S	I	V	A	G	Y	L	V	K	W	M	N	Q	K	I	Q	L	P	D	F	L	L	A	F	.	K	T	T	F	L	L	P	I	L	S	A	I	F	V	M	L	A	M	Y	Y	V	I	T	P	F	G	G	W	I	N	G	G	I	R	T	V	L	T	A	A	G	E	K	G
Query Conservation																																					.
Alig confidence																													.	.							.
Template Conservation																													.	.
Template Sequence		Y	A	V	N	I	V	A	A	L	A	I	I	I	V	G	L	I	I	A	R	M	I	S	N	A	V	N	.	.	R	L	M	I	S	R	K	I	D	A	T	V	A	D	F	L	S	A	L	V	R	Y	G	I	I	A	F	T	L	I	A	A	L	G	R	V	G	V	Q	T	A	S	V	I	A	V	L	G	A	A	G
Template Known Secondary structure				S																									.	.								S																											T	T	T			S	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		239	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions