Job Description P77579 Confidence 1.31% Date Thu Jan 5 12:30:44 GMT 2012 Rank 68 Aligned Residues 104 % Identity 17% Template c3k3gA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:urea transporter; PDBTitle: crystal structure of the urea transporter from desulfovibrio vulgaris2 bound to 1,3-dimethylurea Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.												330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.								.	.	.	.
Predicted Secondary structure																						.						.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence																						.						.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		R	L	F	N	A	Q	L	Y	P	Q	G	K	T	A	M	F	L	A	F	M	.	G	I	S	E	G	.	.	.	.	.	.	.	.	.	.	.	A	I	P	F	A	L	E	S	P	I	T	A	I	P	S	Y	M	V	G	A	I	V	G	S	T	A	A	V	W	L	G	A	.	.	.	.	.	.	.	V	Q	W	F
Query Conservation																						.						.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence																						.						.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	F	G	E	Q	L	L	K	N	P	L	I	E	F	C	D	S	V	C	R	G	C	G	Q	V	M	F	Q	N	N	T	V	T	G	L	L	F	F	A	G	I	F	Y	N	S	T	T	L	G	V	C	A	V	L	G	T	A	A	S	T	L	T	A	Q	L	L	G	V	D	K	P	L	V	R	A	G	L	F	G
Template Known Secondary structure				G	G	G	G	G	G																	G	G	G	T																																								T								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		366	.	.				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		P	E	S	.	.	.	A	I	W	A	W	P	L	V	T	N	L	G	V	Y	M	A	G	I	A	L	G	A	V	I	T	A	L	M	V	V	F	L	R	L	M	M	F	R	K	G
Query Conservation					.	.	.
Alig confidence					.	.	.
Template Conservation
Template Sequence		F	N	G	T	L	A	G	I	A	L	P	F	F	F	N	Y	E	P	A	M	L	G	Y	V	A	L	N	G	A	F	T	T	I	I	M	A	S	L	L	N	F	L	G	K	W	G
Template Known Secondary structure															B				T	T																								G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions