Job Description P77579 Confidence 0.97% Date Thu Jan 5 12:30:44 GMT 2012 Rank 95 Aligned Residues 97 % Identity 11% Template c3hfxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; PDBTitle: crystal structure of carnitine transporter Resolution 3.15 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		I	G	G	L	M	S	T	Q	P	T	Q	L	L	N	F	D	P	S	T	M	Q	W	A	T	S	S	P	V	P	S	T	F	I	G	A	L	I	I	S	I	V	A	G	Y	L	V	.	.	.	K	W	M	N	Q	K	I	Q	L	P	D	F	L	L	A	F	K	T	T	F	L	L	P	I	L	S	A	I	F	V	M
Query Conservation																																																.	.	.
Alig confidence																																																.	.	.								.	.	.
Template Conservation																																																										.	.	.
Template Sequence		L	I	F	A	M	G	T	S	L	G	L	A	T	P	L	V	T	E	C	M	Q	W	L	F	G	I	P	H	T	L	Q	L	D	A	I	I	I	T	C	W	I	I	L	N	A	I	C	V	A	C	G	L	Q	K	G	V	.	.	.	R	I	A	S	D	V	R	S	Y	L	S	F	L	M	L	G	W	V	F	I	V
Template Known Secondary structure																						T	T	S	T	T				T																				S	S				T	T		.	.	.
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	M	Y	Y	V	I	T	P	F	G	G	W	I	N	G	G	I	R	T	V	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	A	S	F	I	M	N	Y	F	T	D	S	V	G	M	L	L	M	Y	L	P	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions