Job Description P77579 Confidence 6.23% Date Thu Jan 5 12:30:44 GMT 2012 Rank 10 Aligned Residues 237 % Identity 10% Template c2ht2B_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:h(+)/cl(-) exchange transporter clca; PDBTitle: structure of the escherichia coli clc chloride channel2 y445h mutant and fab complex Resolution 3.32 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		F	I	G	A	L	I	I	S	I	V	A	G	Y	L	V	K	W	M	N	Q	K	I	Q	L	P	D	F	L	L	A	F	K	T	T	F	L	L	P	I	L	S	A	I	F	V	M	L	A	M	Y	Y	V	I	T	P	F	G	G	W	I	N	G	G	I	R	T	V	L	T	A	A	G	E	K	G	A	L	.	.	M
Query Conservation																																																																															.	.
Alig confidence																								.	.	.																																																					.	.
Template Conservation																								.	.	.
Template Sequence		L	F	M	A	A	V	V	G	T	L	V	G	L	A	A	V	A	F	D	K	G	V	.	.	.	A	W	L	Q	N	Q	R	M	G	A	L	V	H	T	A	D	N	Y	P	L	L	L	T	V	A	F	L	C	S	A	V	L	A	M	F	G	Y	F	L	V	R	K	Y	A	P	E	A	G	G	S	G	I	P	E	I
Template Known Secondary structure																								.	.	.														T		S																										T	T		G	G	G	S	S		S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		Y	A	M	G	I	A	A	A	T	A	I	D	L	G	G	P	I	N	K	A	A	G	F	V	A	F	S	F	T	T	D	H	V	L	P	V	T	A	R	S	I	A	I	V	I	P	P	I	G	L	G	L	A	T	I	I	D	R	R	L	T	G	K	R	L	F	N	A	.	Q	L	Y	P	Q	G	K	T	A	M	F
Query Conservation																																																																						.
Alig confidence																																										.	.	.	.	.	.																							.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		E	G	A	L	E	D	Q	R	P	V	R	W	W	R	V	L	P	V	K	F	F	G	G	L	G	T	L	G	G	G	M	V	L	G	R	E	G	P	T	V	.	.	.	.	.	.	Q	I	G	G	N	I	G	R	M	V	L	D	I	F	R	L	K	G	D	E	A	R	H	T	L	L	A	T	G	A	A	A	G	L
Template Known Secondary structure						T	T		S																					T	T		S		B	S						.	.	.	.	.	.														T	T			S
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.							.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		321	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure							.																	.	.	.	.	.	.
Query SS confidence							.																	.	.	.	.	.	.
Query Sequence		L	A	F	M	G	.	I	S	E	G	A	I	P	F	A	L	E	S	P	I	T	A	.	.	.	.	.	.	I	P	S	Y	M	V	G	A	I	V	G	S	T	A	A	V	W	L	G	A	V	Q	W	F	P	E	S	A	I	W	A	W	P	L	V	T	N	L	G	V	Y	M	A	G	I	A	L	G	A	V	I	T
Query Conservation							.																	.	.	.	.	.	.
Alig confidence							.																	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	F	N	A	P	L	A	G	I	L	F	I	I	E	E	M	R	P	Q	F	R	Y	T	L	I	S	I	K	A	V	F	I	G	V	I	M	S	T	I	M	Y	R	I	F	N	H	E	V	A	L	I	D	V	G	K	L	S	D	A	P	L	N	T	L	W	L	Y	L	I	L	G	I	I	F	G	I	F	G
Template Known Secondary structure						T										T	T	T	T	S		S	S	S																									T	T			S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	V	V	F	L	R	L	M	M	F	R	K	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	F	N	K	W	V	L	G	M	Q	D	L	L	H	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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