Return to main results Retrieve Phyre Job Id

Job DescriptionP77579
Confidence1.73%DateThu Jan 5 12:30:44 GMT 2012
Rank52Aligned Residues26
% Identity12%Templatec2acmA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:mucin-1; PDBTitle: solution structure of the sea domain of human mucin 1 (muc1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40......
Predicted Secondary structure 





Query SS confidence 

























Query Sequence  VKNPQASKTSFWGELPQHVMSGISRM
Query Conservation                
   
    


Alig confidence 

























Template Conservation 








 




 
 

 
  

Template Sequence  NSSLEDPSTDYYQELQRDISEMFLQI
Template Known Secondary structure 
GGGG
TTS
Template Predicted Secondary structure 







Template SS confidence 

























   1055....1060.........1070.........1080
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions