Job Description P77579 Confidence 1.64% Date Thu Jan 5 12:30:44 GMT 2012 Rank 55 Aligned Residues 110 % Identity 15% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	A	R	S	I	A	I	V	I	P	P	I	G	L	G	L	A	T	I	I	D	R	R	L	T	G	K	R	L	F	N	A	Q	L	Y	P	Q	G	K	T	A	M	F	L	A	F	M	G	I	S	E	G	A	I	P	F	A	L	E	S	P	I	T	A	I	P	S	Y	M	V	G	A	I	V	G	S	T	A
Query Conservation
Alig confidence																																																						.	.	.																				.	.	.	.	.	.
Template Conservation																																																						.	.	.																				.	.	.	.	.	.
Template Sequence		S	V	G	Q	A	T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	.	.	.	Y	T	G	A	G	M	N	P	A	R	S	F	A	P	A	I	L	T	R	.	.	.	.	.	.
Template Known Secondary structure																											T	T	S		S																							.	.	.																			T	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.																				.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	W	L	G	A	V	Q	W	F	P	E	S	A	I	W	A	W	P	L	V	T	N	L	G	V	Y	M	A	G	I	A	L	G	A	V	I	T	A	L	M	V	V	F	L	R	L	M	M	F	R	K	G	K	L	L	I	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	T	N	H	W	V	Y	W	V	G	P	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P	R	L	K	S	V	S	E	R	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T																			T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions