Job Description P0A6S5 Confidence 52.07% Date Wed Jan 25 15:20:16 GMT 2012 Rank 37 Aligned Residues 58 % Identity 12% Template c1wpaA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:occludin; PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522 Resolution 1.50 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.														.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	L	W	F	G	K	N	G	I	H	D	Y	T	R	V	N	D	D	V	A	A	Q	Q	A	T	N	A	K	L	K	A	R	N	D	Q	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	D	D	L	N	G	G	Q	E	A	L	E	E	R	A	R	N	E	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		Y	K	R	N	F	D	T	G	.	L	Q	E	Y	K	S	L	Q	S	E	L	D	E	I	N	K	E	L	S	R	L	D	K	E	L	D	D	Y	R	E	E	S	E	E	Y	M	A	A	A	D	E	Y	N	R	L	K	Q	V	K	G	S	A	D	Y	K	S	K	K	N	H	C	K	Q
Template Known Secondary structure										.																												S		T	T	S																		T	S
Template Predicted Secondary structure										.
Template SS confidence
		432	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions