Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S5
Confidence57.10%DateWed Jan 25 15:20:16 GMT 2012
Rank18Aligned Residues26
% Identity15%Templatec1ij3C_
PDB info PDB header:transcriptionChain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.
Predicted Secondary structure 
Query SS confidence 

























Query Sequence  VAAQQATNAKLKARNDQLFAEIDDLN
Query Conservation 
  
      
   
  
  

  
 
Alig confidence 

























Template Conservation 




 





 

 


 





Template Sequence  MKQLEDKVEELLSKSYHLENEVARLK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

























   2.......10.........20.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions