Return to main results Retrieve Phyre Job Id

Job DescriptionP02359
Confidence26.45%DateThu Jan 5 10:57:31 GMT 2012
Rank12Aligned Residues29
% Identity10%Templated1u5ta1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90
Predicted Secondary structure 





Query SS confidence 




























Query Sequence  FEVALENVRPTVEVKSRRVGGSTYQVPVE
Query Conservation 
  

 
  
  


  
 

   



 
Alig confidence 




























Template Conservation 
 


  
  


  

 

    
 


Template Sequence  LEKSIDMLKSLECFEIFQIRGKKFLRSVP
Template Known Secondary structure  TTT



TT

SS
Template Predicted Secondary structure 









Template SS confidence 




























   134.....140.........150.........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions