Return to main results Retrieve Phyre Job Id

Job DescriptionP02359
Confidence100.00%DateThu Jan 5 10:57:31 GMT 2012
Rank1Aligned Residues147
% Identity56%Templatec3gtyS_
PDB info PDB header:chaperone/ribosomal proteinChain: S: PDB Molecule:30s ribosomal protein s7; PDBTitle: promiscuous substrate recognition in folding and assembly activities2 of the trigger factor chaperone
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  RKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPV
Query Conservation       

   
 

 



 


 


  
 


  

  
      


 

  

 
  
  


  
 

   



Alig confidence 















































































Template Conservation 
 
 

    
 

 



 


 


  
  
   

  
      


 

  

 
  
  

   
 

    


Template Sequence  RQIPPDPVFGDVLVAKLINRVMWDGKKTIAQKIVYGAFDIIREKTKKDPLEVFRQAVENVKPVLEVRPRRVGGATYQVPI
Template Known Secondary structure 





SSS


BTTBTTTTTSS


S
SSSS
Template Predicted Secondary structure 






















Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 










Query SS confidence 


































































Query Sequence  EVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW
Query Conservation   
   

  






 

  
  
     

 


 
    
 









 











Alig confidence 


































































Template Conservation   
   

  






  
  
        

 


 
    
 




 
 

 
 



 




Template Sequence  EVQEPRRTSLALRWIVEAARAKKGRPMKEKLAEEIIAAYNNTGTAIKKKEDTHRMAEANRAFAHYRW
Template Known Secondary structure 

TT
SSS
TT
STTSGGG
TT

Template Predicted Secondary structure 















Template SS confidence 


































































   8990.........100.........110.........120.........130.........140.........150.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions