Job Description P02359 Confidence 100.00% Date Thu Jan 5 10:57:31 GMT 2012 Rank 9 Aligned Residues 137 % Identity 29% Template c1s1hG_ PDB info PDB header:ribosome Chain: G: PDB Molecule:40s ribosomal protein s5; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	P	D	P	K	F	G	S	E	L	L	A	K	F	V	N	I	L	M	.	.	.	.	V	D	G	K	K	S	T	A	E	S	I	V	Y	S	A	L	E	T	L	A	Q	R	S	G	K	S	E	L	E	A	F	E	V	A	L	E	N	V	R	P	T	V	E	V	K	S	R	R	V	G	G	S	T	Y	Q	V	P
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.
Template Conservation
Template Sequence		K	R	F	R	K	A	Q	C	P	I	I	E	R	L	T	N	S	L	M	M	N	G	R	N	N	G	K	K	L	K	A	V	R	I	I	K	H	T	L	D	I	I	N	V	L	T	D	Q	N	P	I	Q	V	V	V	D	A	I	T	N	T	G	P	R	E	D	T	T	R	V	G	G	G	G	A	A	R	R	Q	A
Template Known Secondary structure									S	S	S															T	T																				S	S	S																S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																								.	.
Query SS confidence																								.	.	.																								.	.
Query Sequence		V	E	V	R	P	V	R	R	N	A	L	A	M	R	W	I	V	E	A	A	R	K	.	.	.	R	G	D	K	S	M	A	L	R	L	A	N	E	L	S	D	A	A	E	N	K	G	T	.	.	A	V	K	K	R	E	D	V	H	R	M	A	E	A	N	K
Query Conservation																								.	.	.																								.	.
Alig confidence																								.	.	.																								.	.
Template Conservation
Template Sequence		V	D	V	S	P	L	R	R	V	N	Q	A	I	A	L	L	T	I	G	A	R	E	A	A	F	R	N	I	K	T	I	A	E	T	L	A	E	E	L	I	N	A	A	K	G	S	S	T	S	Y	A	I	K	K	K	D	E	L	E	R	V	A	K	S	N	R
Template Known Secondary structure																									S				S	S	S	S												S	S	T	T			S													T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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