Return to main results Retrieve Phyre Job Id

Job DescriptionP76053
Confidence13.63%DateThu Jan 5 12:17:54 GMT 2012
Rank48Aligned Residues36
% Identity22%Templatec2zbkA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:type ii dna topoisomerase vi subunit a; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms
Resolution3.56 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120.........130.........140...... ...150.......
Predicted Secondary structure 














..



Query SS confidence 





























. .










Query Sequence  VLIIHGKGRDDKSHANIVRSYVARWLTEFD. . DVQAYCTALPH
Query Conservation 
 





  
     


  
  

    .. 
 

  
   
Alig confidence 








.....















..










Template Conservation   






 .....

  

  
  
      
   
 
 

 
Template Sequence  SILITSAGQ. . . . . PDRATRRFVRRLNEELKLPVYILTDADPY
Template Known Secondary structure 


SS.....

TTS




SS
Template Predicted Secondary structure 



.....








Template SS confidence 










































   228.230...... ...240.........250.........260.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions