 |
Job Description | P76053 | Confidence | 13.63% | Date | Thu Jan 5 12:17:54 GMT 2012 |
Rank | 48 | Aligned Residues | 36 |
% Identity | 22% | Template | c2zbkA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:type ii dna topoisomerase vi subunit a; |
PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms
|
Resolution | 3.56 Å |
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
. | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | I | I | H | G | K | G | R | D | D | K | S | H | A | N | I | V | R | S | Y | V | A | R | W | L | T | E | F | D | . |
. |
D | V | Q | A | Y | C | T | A | L | P | H |
Query Conservation |   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   | . | . |   |
|   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   | . | . | . | . | . |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
Template Sequence |   |
S | I | L | I | T | S | A | G | Q | . |
. |
. |
. |
. |
P | D | R | A | T | R | R | F | V | R | R | L | N | E | E | L | K | L | P | V | Y | I | L | T | D | A | D | P | Y |
Template Known Secondary structure |   |
|  |  |  |  |
|
| S | S | . | . | . | . | . |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |
|
| S | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|