Job Description P76502 Confidence 99.95% Date Thu Jan 5 12:23:39 GMT 2012 Rank 26 Aligned Residues 142 % Identity 21% Template c3f3kA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein ykr043c; PDBTitle: the structure of uncharacterized protein ykr043c from saccharomyces2 cerevisiae. Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																													.	.	.	.																										.	.	.	.
Query SS confidence																	.	.	.	.																													.	.	.	.																										.	.	.	.
Query Sequence		M	Q	V	F	I	M	R	H	G	D	A	A	L	D	A	.	.	.	.	A	S	D	S	V	R	P	L	T	T	N	G	C	D	E	S	R	L	M	A	N	W	L	K	G	Q	K	V	.	.	.	.	E	I	E	R	V	L	V	S	P	F	L	R	A	E	Q	T	L	E	E	V	G	D	C	L	N	.	.	.	.
Query Conservation																	.	.	.	.																													.	.	.	.																										.	.	.	.
Alig confidence																	.	.	.	.																													.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		P	R	C	I	I	V	R	H	G	Q	T	E	W	S	K	S	G	Q	Y	T	G	L	T	D	L	P	L	T	P	Y	G	E	G	Q	X	L	R	T	G	E	S	V	F	R	N	Q	F	L	N	P	D	N	I	T	Y	I	F	T	S	P	R	L	R	A	R	Q	T	V	D	L	V	L	K	P	L	S	D	E	Q	R
Template Known Secondary structure																		T				S	S																						T				S		G	G	G								S	S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80																																							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.													.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	S	S	A	E	V	L	P	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	C	G	D	V	G	L	V	S	A	Y	L	Q	A	L	.	.	.	.	.	.	.	.	.	.	.	.	T	N	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	I	R	V	V	V	D	D	D	L	R	E	W	E	Y	G	D	Y	E	G	X	L	T	R	E	I	I	E	L	R	K	S	R	G	L	D	K	E	R	P	W	N	I	W	R	D	G	C	E	N	G	E	T	T	Q	Q	I	G	L	R	L	S	R	A	I	A	R	I	Q	N	L	H	R	K	H	Q	S	E	G
Template Known Secondary structure			T	S						G	G	G	S					G	G	G	T	T													T	T			S	S	S										T	T	S																											T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		G	V	A	S	V	L	V	I	S	H	L	P	L	V	G	Y	L	V	A	E	L	C	P	G	E	T	P	P	M	F	T	.	.	.	.	T	S	A	I	A	S	V	T	L	D	E	S	G
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.
Template Conservation
Template Sequence		R	A	S	D	I	X	V	F	A	H	G	H	A	L	R	Y	F	A	A	I	W	F	G	L	G	V	Q	K	K	C	E	T	I	E	E	I	Q	N	V	K	S	Y	D	D	D	T	V	P
Template Known Secondary structure																							T	T		S							S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions