Job Description P16919 Confidence 26.08% Date Wed Jan 25 15:20:40 GMT 2012 Rank 15 Aligned Residues 41 % Identity 29% Template d1m3ya2 SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Group II dsDNA viruses VP Major capsid protein vp54 Resolution 2.00

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		1239	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	N	L	Y	Q	Y	P	L	N	P	L	Q	Q	I	D	P	M	G	L	L	Q	T	W	D	D	A	R	S	G	A	C	T	G	G	V	C	G	V	L	S	R	I	I	G	P	S	K	F	D	S	T	A	D	A	A	L	D	A
Query Conservation
Alig confidence																.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	Y	L	Y	S	F	A	L	K	P	A	G	R	.	Q	P	S	G	T	C	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	R	I	D	N	A	T	L	S	L	T	Y	K	T	C	S	I	D	A
Template Known Secondary structure		T						S	S	S		T	T		S	.	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S															T
Template Predicted Secondary structure																.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370																		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions