Job Description P16919 Confidence 15.26% Date Wed Jan 25 15:20:40 GMT 2012 Rank 35 Aligned Residues 102 % Identity 20% Template c3nzwH_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: H: PDB Molecule:proteasome component pup1; PDBTitle: crystal structure of the yeast 20s proteasome in complex with 2b Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.		.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		L	Q	Q	I	D	P	M	G	L	L	Q	T	W	D	D	A	R	S	G	A	C	T	G	G	V	C	G	V	L	S	R	I	.	I	G	P	S	K	F	D	S	T	A	D	A	A	L	D	A	L	K	E	T	Q	N	R	S	L	C	N	D	M	E	Y	S	G	I	V	C	K	D	T	N	G	K	Y	F	A	S	K
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		L	F	S	I	H	A	H	G	S	T	D	V	G	Y	Y	L	S	L	G	S	G	S	L	A	A	M	A	V	L	E	S	H	W	K	Q	D	L	T	K	E	E	A	I	K	L	A	S	D	A	I	Q	A	G	I	W	N	D	L	G	S	G	S	N	V	D	V	C	V	M	E	I	G	K	D	A	E	Y	L	R	N
Template Known Secondary structure							T	T	S						S					S	T	T														S	S																						T	T			S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		1329	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	D	N	L	R	K	E	S	Y	P	L	K	R	K	C	P	T	G	T	D	R	V
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		Y	L	T	P	N	V	R	E	E	K	Q	K	S	Y	K	.	F	P	R	G	T	T	A	V
Template Known Secondary structure												S	S				.			T	T		S
Template Predicted Secondary structure																	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions