Job Description P16919 Confidence 42.87% Date Wed Jan 25 15:20:40 GMT 2012 Rank 5 Aligned Residues 213 % Identity 17% Template c3nqhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glycosyl hydrolase; PDBTitle: crystal structure of a glycosyl hydrolase (bt_2959) from bacteroides2 thetaiotaomicron vpi-5482 at 2.11 a resolution Resolution 2.11 Å

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		1118	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.						.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		R	A	D	R	V	S	S	E	S	R	A	W	L	A	Q	C	G	L	T	V	E	Q	L	A	R	Q	V	E	P	E	Y	T	P	A	R	K	A	H	L	Y	H	C	D	H	R	G	L	P	.	.	.	.	.	L	A	L	I	S	E	D	G	N	T	A	W	S	A	E	Y	D	E	W	G	N	Q	L	N	E	E	N
Query Conservation																																																		.	.	.	.	.
Alig confidence																															.	.	.																	.	.	.	.	.																				.	.
Template Conservation																															.	.	.																																									.	.
Template Sequence		K	T	E	K	V	V	N	N	G	I	P	W	F	D	D	R	G	E	I	V	N	A	H	G	A	C	I	V	E	.	.	.	E	N	G	R	Y	Y	L	F	G	E	Y	K	S	D	K	S	N	A	F	P	G	F	S	C	Y	S	S	D	D	L	V	N	W	K	F	E	R	V	V	L	.	.	P	X	Q	S	S	G
Template Known Secondary structure									T	T	S			B		T	T	S		B											.	.	.		T	T											S	S		S	S										S	S	S	S	S									.	.				S	S	S
Template Predicted Secondary structure																															.	.	.																																									.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.
		1193	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.						.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		P	H	H	V	Y	Q	P	Y	R	L	P	G	Q	Q	H	D	E	E	S	G	L	Y	Y	N	.	.	.	.	.	R	H	R	Y	Y	D	P	L	Q	G	R	Y	I	T	Q	D	P	M	G	L	K	G	G	W	N	L	Y	Q	Y	P	L	N	P	L	Q	Q	I	D	P	M	G	L	L	Q	T	W	D	D	A	R	S
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.																																													.	.
Template Conservation																																																																											.	.
Template Sequence		I	L	G	P	D	R	V	G	E	R	V	K	V	X	K	C	P	S	T	G	E	Y	V	X	Y	X	H	A	D	D	X	N	Y	K	D	P	H	I	G	Y	A	T	C	S	T	I	A	G	E	Y	K	L	H	G	P	L	L	Y	E	G	K	P	I	R	R	W	D	X	G	T	Y	Q	D	.	.	T	D	G	T	G
Template Known Secondary structure		T	T	S	T	T												T	T	T												T	T	S		S									S	S	T	T	S											T	T							S							.	.	T	T	S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.
		1268	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.														.	.	1330	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	C	T	G	G	V	C	G	V	L	S	R	I	I	G	P	S	K	F	D	S	T	A	D	A	A	L	D	A	L	K	E	T	Q	N	R	S	L	C	N	D	M	E	Y	S	G	I	V	C	K	D	T	N	G	K	Y	F	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	E	T	D	N	L
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.									.																									.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.									.																									.	.
Template Sequence		Y	L	L	L	H	G	G	I	.	.	.	.	.	.	.	.	.	.	V	Y	R	L	S	K	D	Y	.	R	T	A	E	E	K	V	V	S	G	V	G	G	S	H	G	E	S	P	A	X	F	K	K	.	.	D	G	T	Y	F	F	L	F	S	N	L	T	S	W	E	K	N	D	N	F	Y	F	T	A	P	S	V
Template Known Secondary structure						G	G	G		.	.	.	.	.	.	.	.	.	.						T	T	S	.	S	S							S		S	T	T												.	.	T	T									S		T	T	S										S	S	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.									.																									.	.
Template SS confidence
		175	.	.	.	.	180	.	.											.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		1335	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	E	S	Y	P	L	K	R	K	C	P	T	G	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	P	W	T	R	Q	G	L	F	A	P	E	G	S	L
Template Known Secondary structure		T									S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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