Job Description P16919 Confidence 15.03% Date Wed Jan 25 15:20:40 GMT 2012 Rank 39 Aligned Residues 84 % Identity 17% Template c3h4pB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:proteasome subunit alpha; PDBTitle: proteasome 20s core particle from methanocaldococcus2 jannaschii Resolution 4.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290		.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	Q	Q	I	D	P	M	G	L	L	Q	T	W	D	D	A	R	S	G	A	C	T	G	G	V	C	G	V	L	S	R	I	I	G	P	S	K	F	D	S	T	.	A	D	A	A	L	D	A	L	K	E	T	Q	N	R	S	L	C	N	D	M	E	Y	S	G	I	V	C	K	D	T	N	G	K	Y	F	A	S	K
Query Conservation																																											.
Alig confidence																																											.																				.
Template Conservation																																																															.
Template Sequence		L	F	E	T	D	P	S	G	A	L	I	E	Y	K	A	T	A	I	G	S	G	R	P	V	V	M	E	L	L	E	K	E	Y	R	D	D	I	T	L	D	E	G	L	E	L	A	I	T	A	L	T	K	A	N	E	D	I	K	P	E	N	.	V	D	V	C	I	I	T	V	K	D	A	Q	F	K	K	I	P	V
Template Known Secondary structure							S	S							S					S	T	T					T	T	T							T	T																		S	S	S			T	T	S	.								T	T	T	T							T
Template Predicted Secondary structure																																																															.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		1329	1330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	D	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	K	K	L
Template Known Secondary structure		T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions