Job Description P16919 Confidence 96.47% Date Wed Jan 25 15:20:40 GMT 2012 Rank 1 Aligned Residues 269 % Identity 15% Template c2oy7A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer surface protein a; PDBTitle: the crystal structure of ospa mutant Resolution 1.55 Å

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.	.
Predicted Secondary structure																																															.																									.	.
Query SS confidence																																															.																									.	.
Query Sequence		D	R	I	T	V	T	D	S	L	N	R	R	E	V	L	H	T	E	G	G	A	G	L	K	R	V	V	K	K	E	L	A	D	G	S	V	T	R	S	G	Y	D	A	A	G	.	R	L	T	A	Q	T	D	A	A	G	R	R	T	E	Y	G	L	N	V	V	S	G	D	I	.	.	T	D	I	T	T	P	D	G
Query Conservation																																															.																									.	.
Alig confidence																																															.																		.							.	.
Template Conservation																																																																	.
Template Sequence		N	S	V	S	V	D	L	P	G	S	M	K	V	L	V	S	K	S	S	N	A	D	G	K	Y	D	L	I	A	T	V	D	A	L	E	L	S	G	T	S	D	K	N	N	G	S	G	V	L	E	G	V	K	A	D	A	S	K	V	K	L	T	I	.	S	D	D	L	G	Q	T	T	L	E	V	F	K	S	D	G
Template Known Secondary structure									G	G	G							S	S			S	S	S									T	T								S		S	S	S									T	T	S								.		T	T	S	S									T	T	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.			.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		R	E	T	K	F	Y	Y	N	D	G	N	Q	L	T	A	V	V	S	P	D	G	L	E	S	R	R	E	Y	D	E	P	G	R	L	V	S	E	.	.	T	S	R	S	G	E	T	V	R	Y	R	Y	D	D	A	H	S	E	L	P	A	T	T	T	D	A	T	G	S	T	R	Q	M	T	W	S	R	Y	G	Q	L
Query Conservation																																							.	.
Alig confidence								.	.	.	.	.	.	.	.																								.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		S	T	L	V	S	K	.	.	.	.	.	.	.	.	K	V	T	S	K	D	K	S	S	T	Y	E	K	F	N	E	K	G	E	L	S	E	K	Y	I	T	R	A	D	K	S	S	T	Y	E	K	F	N	E	K	G	E	L	S	E	K	Y	I	T	R	A	D	K	S	S	T	Y	E	K	F	N	E	K	G	E	L
Template Known Secondary structure		S	S					.	.	.	.	.	.	.	.					T	T	S									T	T	S										T	T	S									T	T	S										T	T	S									T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		544	.	.			.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.			.	.	.	570	.	.	.	.	.	.	.	.		.	580	.	.	.											.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																					.	.													.						.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.																					.	.													.						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	F	.	.	T	D	C	S	G	Y	Q	T	R	Y	E	Y	D	R	F	G	Q	M	T	A	.	.	V	H	R	E	E	G	I	S	L	Y	R	R	.	Y	D	N	R	G	.	.	.	.	.	.	.	.	.	.	R	L	T	S	V	K	D	A	Q	G	R	E	T	R	Y	E	Y	N	A	A	G	D	L	T	A
Query Conservation					.	.																					.	.													.						.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																					.	.													.						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	K	Y	I	T	R	A	D	K	S	S	T	Y	E	K	F	N	E	K	G	E	V	S	E	K	Y	I	T	R	A	D	G	T	R	L	E	Y	T	G	I	K	S	D	G	S	G	K	A	K	E	V	L	K	G	Y	V	L	E	G	T	L	T	A	E	K	T	T	L	V	V	K	E	G	T	V	T	L	S	K
Template Known Secondary structure									T	T	S									T	T	S										T	T	S							S			T	T	S									T	T									S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630						.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		V	I	T	P	D	G	N	R	S	E	T	Q	Y	D	A	W	G	K	A	V	S	T	.	.	.	.	.	T	Q	G	G	L	T	R	S	M	E	Y	D	A	A	G	R	V	I	S	L	T	N	E	N	G	S	H	S	V	F	S	Y	D	A	L	D
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.
Template Conservation
Template Sequence		N	I	S	K	S	G	E	V	S	V	E	L	N	D	T	D	S	S	A	A	T	K	K	T	A	A	W	N	S	G	T	S	T	L	T	I	T	V	N	S	K	K	T	K	D	L	V	F	T	S	S	N	T	I	T	V	Q	Q	Y	D	S	N	G
Template Known Secondary structure					T	T														T	T	T								T	T	T	T							T	T										T	T	S							B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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