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Job DescriptionP0AC23
Confidence100.00%DateThu Jan 5 11:16:57 GMT 2012
Rank1Aligned Residues257
% Identity55%Templatec3klzE_
PDB info PDB header:membrane proteinChain: E: PDB Molecule:putative formate transporter 1; PDBTitle: pentameric formate channel with formate bound
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  VYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASG
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Template Sequence  EGKAKKAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVLILVAKASG
Template Known Secondary structure 
TTT
TTS
T


SS

T
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   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  RITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY
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Template Sequence  KISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTF
Template Known Secondary structure  SS
TGGGTGGGTTS


T
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  SGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNI
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Template Sequence  SARSLTDKVMVLILPVAMFVSSGFEHCIANMFQVPMAIGIKYFAPESFWAMTGANIAQYADLNFVNFIVNNLIPVTLGNI
Template Known Secondary structure  T
SSTT




T

GGGGTT
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   183......190.........200.........210.........220.........230.........240.........250.........260..
 
   264.....270.........280
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Query Sequence  IGGGLLVGLTYWVIYLR
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Template Sequence  VGGGVFVGMWYWLIYLK
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   263......270.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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