Job Description P0AC23 Confidence 88.37% Date Thu Jan 5 11:16:57 GMT 2012 Rank 8 Aligned Residues 212 % Identity 16% Template c3iyzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: structure of aquaporin-4 s180d mutant at 10.0 a resolution from2 electron micrograph Resolution 10.00 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.		100	.	.	.	.
Predicted Secondary structure																																																																			.	.								.
Query SS confidence																																																																			.	.								.
Query Sequence		T	K	H	P	L	K	T	F	Y	L	A	I	T	A	G	V	F	I	S	I	A	F	V	F	Y	I	T	A	T	T	G	T	G	T	M	P	F	G	M	A	K	L	V	G	G	I	C	F	S	L	G	L	I	L	C	V	V	C	G	A	D	L	F	T	S	.	.	T	V	L	I	V	V	A	.	K	A	S	G	R
Query Conservation																																																																			.	.								.
Alig confidence																						.	.																																												.	.								.
Template Conservation																						.	.
Template Sequence		T	Q	A	F	W	K	A	V	T	A	E	F	L	A	M	L	I	F	V	L	.	.	L	S	V	G	S	T	I	N	W	G	G	S	N	P	L	P	V	D	M	V	L	I	S	L	C	F	G	L	S	I	A	T	M	V	Q	C	F	G	H	I	S	G	G	H	I	N	P	A	V	T	V	A	M	V	C	T	R	K
Template Known Secondary structure																						.	.						T			T	T	T	T	S																									T	T	T	S					S											T	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	T	W	G	Q	L	A	K	N	W	L	N	V	Y	F	G	N	L	V	G	A	L	L	F	V	L	L	M	W	L	S	G	E	Y	M	T	A	N	G	Q	W	G	L	N	V	L	Q	T	A	D	H	K	V	H	H	T	F	I	E	A	V	C	L	G	I	L	A	N	L	M	V	C	L	A	V	W	M	S	.	.
Query Conservation																																																																																.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	I	A	K	S	V	F	Y	I	T	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P	P	S	V	V	G	G	L	G	V	T	T	V	H	G	.	.	.	.	.	.	.	.	.	.	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D
Template Known Secondary structure		S																										T	S		G	G	G	G	G	T	T	T						T	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.											.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
					183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																			.
Query SS confidence		.	.	.																																			.
Query Sequence		.	.	.	Y	S	G	R	S	L	M	D	K	A	F	I	M	V	L	P	V	A	M	F	V	A	S	G	F	E	H	S	I	A	N	M	F	M	.	I	P	M	G	I	V	I	R	D	F	A	S	P	E	F	W	T	A	V	G	S	A	P	E	N	F	S	H	L	T	V	M	N	F	I	T	D	N	L	I	P	V
Query Conservation		.	.	.																																			.
Alig confidence		.	.	.																																			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		D	K	R	T	D	V	T	G	S	V	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G	A	S	M	N	P	A	R	S	F	G	P	A	V	I	M	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	E	N	H	W	I	Y	.
Template Known Secondary structure		S	S	S	S			S	S													T					T	S	S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T				.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																										.	.	.	230	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	G	N	I	I	G	G	G	L	L	V	G	L	T	Y	W	V	I	Y
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		W	V	G	P	I	I	.	G	A	V	L	A	G	A	L	Y	E	Y	V	F
Template Known Secondary structure								.												T
Template Predicted Secondary structure								.
Template SS confidence
		234	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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