Job Description P0AC23 Confidence 95.64% Date Thu Jan 5 11:16:57 GMT 2012 Rank 3 Aligned Residues 236 % Identity 14% Template c1ldaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glycerol uptake facilitator protein; PDBTitle: crystal structure of the e. coli glycerol facilitator (glpf) without2 substrate glycerol Resolution 2.80 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.		100	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.								.
Query SS confidence																																																																	.	.								.
Query Sequence		H	P	L	K	T	F	Y	L	A	I	T	A	G	V	F	I	S	I	A	F	V	F	Y	I	T	A	T	T	G	T	G	T	M	P	F	G	M	A	K	L	V	G	G	I	C	F	S	L	G	L	I	L	C	V	V	C	G	A	D	L	F	T	S	.	.	T	V	L	I	V	V	A	.	K	A	S	G	R	I	T
Query Conservation																																																																	.	.								.
Alig confidence																																				.	.	.																											.	.								.
Template Conservation																																				.	.	.
Template Sequence		T	L	K	G	Q	C	I	A	E	F	L	G	T	G	L	L	I	F	F	G	V	G	C	V	A	A	L	K	V	A	G	A	S	F	.	.	.	G	Q	W	E	I	S	V	I	W	G	L	G	V	A	M	A	I	Y	L	T	A	G	V	S	G	A	H	L	N	P	A	V	T	I	A	L	W	L	F	A	C	F	D
Template Known Secondary structure																															S					.	.	.																																								S
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.									.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		W	G	Q	L	A	K	N	W	L	N	V	Y	F	G	N	L	V	G	A	L	L	F	V	L	L	M	W	L	S	G	E	Y	M	T	A	N	G	Q	W	G	L	N	V	L	Q	T	A	D	H	K	.	.	.	.	.	.	.	.	V	H	H	T	F	I	E	A	V	C	L	G	I	L	A	N	L	M	V	C	L	A
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	K	V	I	P	F	I	V	S	Q	V	A	G	A	F	C	A	A	A	L	V	Y	G	L	Y	Y	N	L	F	F	D	F	E	Q	T	H	H	I	V	R	G	S	V	E	S	V	D	L	A	G	T	F	S	T	Y	P	N	P	H	I	N	F	V	Q	A	F	A	V	E	M	V	I	T	A	I	L	M	G	L
Template Known Secondary structure		G	G	G																							T											T	T			T	T	S	G	G	G					T	T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		179	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.
Predicted Secondary structure						.	.	.	.																																																																			.	.
Query SS confidence						.	.	.	.																																																																			.	.
Query Sequence		V	W	M	S	.	.	.	.	Y	S	G	R	S	L	M	D	K	A	F	I	M	V	L	P	V	A	M	F	V	A	S	G	F	E	H	S	I	A	N	M	F	M	I	P	M	G	I	V	I	R	D	F	A	S	P	E	F	W	T	A	V	G	S	A	P	E	N	F	S	H	L	T	V	M	.	.	N	F	I	T
Query Conservation						.	.	.	.																																																																			.	.
Alig confidence						.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	A	L	T	D	D	G	N	G	V	P	R	G	P	L	A	P	L	L	I	G	L	L	I	A	V	I	G	A	S	M	G	P	L	T	G	F	A	M	.	.	.	.	.	.	.	.	.	.	.	N	P	A	R	D	F	G	P	K	V	F	A	W	L	A	G	W	G	N	V	A	F	T	G	G	R	D	I	P
Template Known Secondary structure								T	T	S	S	S			G	G	G																T									.	.	.	.	.	.	.	.	.	.	.															T	T	T	T	T						S	S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.												.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	L	I	P	V	T	I	G	N	I	I	G	G	G	L	L	V	G	L	T	Y	W	V	I	Y	L	R	E
Query Conservation
Alig confidence									.					.
Template Conservation									.					.
Template Sequence		Y	F	L	V	P	L	F	.	G	P	I	V	.	G	A	I	V	G	A	F	A	Y	R	K	L	I	G	R	H
Template Known Secondary structure		T	T						.					.													T	G	G	G
Template Predicted Secondary structure									.					.
Template SS confidence
		232	.	.	.	.	.	.		.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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