Job Description P77608 Confidence 7.87% Date Thu Jan 5 12:30:59 GMT 2012 Rank 45 Aligned Residues 42 % Identity 19% Template c3qo6B_ PDB info PDB header:photosynthesis Chain: B: PDB Molecule:protease do-like 1, chloroplastic; PDBTitle: crystal structure analysis of the plant protease deg1 Resolution 2.50 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.													.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		L	R	T	G	D	I	I	L	T	G	A	L	G	P	.	.	.	.	.	.	.	.	.	.	.	.	M	V	A	V	N	A	G	D	R	F	E	A	H	I	E	G	I	G	S	.	.	.	V	A	A	T	F	S	S	A	A	P	K
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence											.	.				.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation											.	.
Template Sequence		L	V	L	G	D	I	I	T	S	.	.	V	N	G	T	K	V	S	N	G	S	D	L	Y	R	I	L	D	Q	C	K	V	G	D	E	V	T	V	E	V	L	R	G	D	H	K	E	K	I	S	V	T	L	E	P	K	P	D	E
Template Known Secondary structure											.	.		T	T				S	S									T	T			T	T										S	S	S	B
Template Predicted Secondary structure											.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions