Job Description P31828 Confidence 100.00% Date Thu Jan 5 11:48:53 GMT 2012 Rank 11 Aligned Residues 405 % Identity 20% Template c3eoqB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative zinc protease; PDBTitle: the crystal structure of putative zinc protease beta-2 subunit from thermus thermophilus hb8 Resolution 2.29 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	G	Q	L	D	N	G	L	R	Y	M	I	Y	P	H	A	H	P	K	D	Q	V	N	L	W	L	Q	I	H	T	G	S	L	Q	E	E	D	N	E	L	G	V	A	H	F	V	E	H	M	M	F	N	G	T	K	T	W	P	G	N	K	V	I	E	T	F	E	S	M	G	L	R	F	G	R	D	V	N
Query Conservation
Alig confidence																							.																																																		.	.	.	.
Template Conservation																							.																																																		.	.	.	.
Template Sequence		F	R	E	A	E	L	R	N	G	L	R	V	I	A	E	V	V	P	G	A	R	.	S	V	A	L	G	Y	F	V	K	T	G	A	R	D	E	T	K	E	E	S	G	V	S	H	F	L	E	H	X	V	F	K	G	P	E	D	X	D	A	L	A	V	N	R	A	F	D	R	X	.	.	.	.	G	A	Q	Y	N
Template Known Secondary structure								T	T	S									T	T		S	.									S		S	G	G	G	S		S	T	T	T	T										T	T			T	T													T	.	.	.	.	T
Template Predicted Secondary structure																							.																																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	T	S	Y	D	E	T	V	Y	Q	V	S	L	P	T	T	Q	K	Q	N	L	Q	Q	V	M	A	I	F	S	E	W	S	N	A	A	T	F	E	K	L	E	V	D	A	E	R	G	V	I	T	E	E	W	R	A	H	Q	D	A	K	W	R	T	S	Q	A	R	R	P	F	L	L	A	N	T	R	N	L	D
Query Conservation
Alig confidence																.	.	.																	.
Template Conservation																.	.	.																	.
Template Sequence		A	F	T	S	E	E	A	T	V	Y	Y	G	A	V	.	.	.	L	P	E	F	A	Y	D	L	L	G	L	F	A	K	L	L	.	R	P	A	L	R	E	E	D	F	Q	T	E	K	L	V	I	L	E	E	I	A	R	Y	Q	D	R	P	G	F	X	A	Y	E	W	A	R	A	R	F	F	Q	G	H	P	L	G
Template Known Secondary structure						S	S									.	.	.		G	G	G												T	.	S																							T	T																T	T		G	G	G
Template Predicted Secondary structure																.	.	.																	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	P	I	G	L	M	D	T	V	A	T	V	T	P	A	Q	L	R	Q	F	Y	Q	R	W	Y	Q	P	N	N	M	T	F	I	V	V	G	D	I	D	S	K	E	A	L	A	L	I	K	D	N	L	S	K	L	P	A	N	K	A	A	E	N	R	V	W	P	T	K	A	E	N	H	L	R	F	N	I	I	N
Query Conservation
Alig confidence																																																																.	.	.
Template Conservation																																																																.	.	.
Template Sequence		N	S	V	L	G	T	R	E	S	I	T	A	L	T	R	E	G	X	A	A	Y	H	R	R	R	Y	L	P	K	N	X	V	L	A	A	T	G	R	V	D	F	D	R	L	L	A	E	A	E	R	L	T	E	A	W	P	E	G	E	A	E	R	.	.	.	A	Y	P	P	L	T	P	A	F	G	V	E	E	R	P
Template Known Secondary structure				S	S																								G	G	G								S														T	T	T	S								.	.	.
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	E	N	R	V	N	G	I	A	L	Y	Y	R	L	P	M	V	Q	V	N	D	E	Q	S	F	I	E	Q	A	E	W	S	M	L	V	Q	L	F	N	Q	R	L	Q	E	R	I	Q	S	G	E	L	K	T	I	S	G	G	T	A	R	S	V	K	I	A	P	D	Y	Q	S	L	F	F	R	V	N	A	R	D
Query Conservation
Alig confidence																				.	.																															.	.	.
Template Conservation																				.	.																															.	.	.
Template Sequence		Y	E	K	A	R	A	L	Y	L	V	A	L	F	P	G	V	A	Y	.	.	Q	E	E	A	R	F	P	G	Q	V	L	A	H	L	L	G	E	E	G	S	G	R	L	H	F	A	L	V	D	K	.	.	.	G	L	A	E	V	A	S	F	G	L	E	E	A	D	R	A	G	T	F	H	A	Y	V	Q	A	D	P
Template Known Secondary structure			T	T		S	S												T	.	.	T		T	T														T	T	T	S						T	T	T	T	.	.	.	T	S												T	T												G
Template Predicted Secondary structure																				.	.																															.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	M	Q	D	A	A	N	A	L	M	A	E	L	A	T	I	D	Q	H	G	F	S	A	E	E	L	D	D	V	K	S	T	R	L	T	W	L	K	N	A	V	D	Q	Q	A	E	R	D	L	R	M	L	T	S	R	L	A	S	S	S	L	N	N	T	P	F	L	S	P	E	E	T	Y	Q	L	S	K	R	L
Query Conservation
Alig confidence																																														.	.	.	.	.																								.	.	.	.
Template Conservation																																														.	.	.	.	.																								.	.	.	.
Template Sequence		A	R	K	G	E	V	L	A	V	L	Q	E	E	L	D	R	L	G	R	E	G	V	G	E	E	E	V	E	R	A	K	T	P	L	A	T	G	L	V	F	A	G	E	T	.	.	.	.	.	P	X	Q	R	L	F	H	L	G	X	E	Y	L	Y	T	G	R	Y	L	S	L	E	E	.	.	.	.	V	K	A	R
Template Known Secondary structure		G	G																																									T	S	.	.	.	.	.																S	S							.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.																								.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.						.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Q	I	T	V	Q	S	L	A	E	K	W	Q	Q	L	R	K	N	Q	D	A	F	W	E	Q	M	V	N	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	R	V	T	S	R	E	V	N	A	L	L	E	R	G	F	L	E	K	G	L	Y	Y	L	V	L	P	H	G	A
Template Known Secondary structure				T											T	T	T	T	T	S	S									S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.